BLASTX nr result

ID: Coptis24_contig00031214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031214
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN97178.1| MYB transcription factor [Populus trichocarpa]         267   1e-69
ref|XP_002318324.1| predicted protein [Populus trichocarpa] gi|2...   263   1e-68
ref|XP_002279279.1| PREDICTED: myb-related protein B [Vitis vini...   263   2e-68
emb|CAN83952.1| hypothetical protein VITISV_022615 [Vitis vinifera]   263   2e-68
ref|XP_002329751.1| predicted protein [Populus trichocarpa] gi|2...   257   1e-66

>gb|ACN97178.1| MYB transcription factor [Populus trichocarpa]
          Length = 236

 Score =  267 bits (682), Expect = 1e-69
 Identities = 134/196 (68%), Positives = 158/196 (80%), Gaps = 4/196 (2%)
 Frame = +3

Query: 3   EDEKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLLAS 182
           EDEKL+ELVE YGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINR+PFTEEEEERLLAS
Sbjct: 11  EDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLAS 70

Query: 183 HRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKH 362
           HRIHGNRW++IARLFPGRTDNAVKNHWHVIMARR RERSR +AKR AQ+L++ +K  SK 
Sbjct: 71  HRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERSRLHAKRTAQALVNEQKFSSKQ 130

Query: 363 EMGMKIEHRNHSS-IREYYERCSDPIIYNHH---ANLKNIYSPVPNYSPAIDKNDPVEFY 530
           +M +  E R+ SS +++Y E+     +  H    A  K  Y+   + S   D+N P+EFY
Sbjct: 131 DMQINCETRSFSSFVKKYCEKFGQYPLITHSYLPAFWKEFYN--DDLSNCEDQNRPIEFY 188

Query: 531 DFLQVNTDSNRSEVIN 578
           DFLQVNT+SN+SEVI+
Sbjct: 189 DFLQVNTESNKSEVID 204


>ref|XP_002318324.1| predicted protein [Populus trichocarpa] gi|222858997|gb|EEE96544.1|
           predicted protein [Populus trichocarpa]
           gi|225626259|gb|ACN97179.1| MYB transcription factor
           [Populus trichocarpa]
          Length = 243

 Score =  263 bits (673), Expect = 1e-68
 Identities = 136/197 (69%), Positives = 156/197 (79%), Gaps = 5/197 (2%)
 Frame = +3

Query: 3   EDEKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLLAS 182
           EDEKL+ELVE YGPHNWNAIAEKL GRSGKSCRLRWFNQLDPRINR+PFTEEEEERLLAS
Sbjct: 11  EDEKLKELVEKYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLAS 70

Query: 183 HRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKH 362
           HRIHGNRW+IIAR FPGRTDNAVKNHWHVIMARR RERSR +AKRAAQ+L++  K  SK 
Sbjct: 71  HRIHGNRWAIIARFFPGRTDNAVKNHWHVIMARRYRERSRLHAKRAAQTLVNDNKLSSKQ 130

Query: 363 E-MGMKIEHRNHSSI-REYYERCSDPIIYNHH---ANLKNIYSPVPNYSPAIDKNDPVEF 527
           + M M  E RN SS  ++Y E+     +  H    A  K  Y+  P++    D++ P+EF
Sbjct: 131 DHMHMDCETRNFSSFSKKYCEKYGQYPMVTHSYLPAFCKEFYNEDPSHCE--DQSRPIEF 188

Query: 528 YDFLQVNTDSNRSEVIN 578
           YDFLQVNTDSN+SEVI+
Sbjct: 189 YDFLQVNTDSNKSEVID 205


>ref|XP_002279279.1| PREDICTED: myb-related protein B [Vitis vinifera]
           gi|297734369|emb|CBI15616.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  263 bits (671), Expect = 2e-68
 Identities = 137/194 (70%), Positives = 151/194 (77%), Gaps = 2/194 (1%)
 Frame = +3

Query: 3   EDEKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLLAS 182
           EDEKLRELVE +GPHNWNAIAEKL GRSGKSCRLRWFNQLDPRINR PFTEEEEERLLAS
Sbjct: 11  EDEKLRELVERHGPHNWNAIAEKLPGRSGKSCRLRWFNQLDPRINRAPFTEEEEERLLAS 70

Query: 183 HRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKH 362
           HRIHGNRW++IARLFPGRTDNAVKNHWHVIMARRCRE+S+FYAKRAAQS I+ RKS+SK 
Sbjct: 71  HRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCREKSKFYAKRAAQSWINERKSISKP 130

Query: 363 EMGMKI--EHRNHSSIREYYERCSDPIIYNHHANLKNIYSPVPNYSPAIDKNDPVEFYDF 536
           +    I  + RN SS   Y E C + +I  H   +              D+  PVEFYDF
Sbjct: 131 DRQQMIGCDTRNLSS---YVENCYENMI--HCTKMLE------------DRTQPVEFYDF 173

Query: 537 LQVNTDSNRSEVIN 578
           L VNTDSNRSEVI+
Sbjct: 174 LNVNTDSNRSEVID 187


>emb|CAN83952.1| hypothetical protein VITISV_022615 [Vitis vinifera]
          Length = 371

 Score =  263 bits (671), Expect = 2e-68
 Identities = 137/194 (70%), Positives = 151/194 (77%), Gaps = 2/194 (1%)
 Frame = +3

Query: 3   EDEKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLLAS 182
           EDEKLRELVE +GPHNWNAIAEKL GRSGKSCRLRWFNQLDPRINR PFTEEEEERLLAS
Sbjct: 11  EDEKLRELVERHGPHNWNAIAEKLPGRSGKSCRLRWFNQLDPRINRAPFTEEEEERLLAS 70

Query: 183 HRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKH 362
           HRIHGNRW++IARLFPGRTDNAVKNHWHVIMARRCRE+S+FYAKRAAQS I+ RKS+SK 
Sbjct: 71  HRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCREKSKFYAKRAAQSWINERKSISKP 130

Query: 363 EMGMKI--EHRNHSSIREYYERCSDPIIYNHHANLKNIYSPVPNYSPAIDKNDPVEFYDF 536
           +    I  + RN SS   Y E C + +I  H   +              D+  PVEFYDF
Sbjct: 131 DRQQMIGCDTRNLSS---YVENCYENMI--HCTKMLE------------DRTQPVEFYDF 173

Query: 537 LQVNTDSNRSEVIN 578
           L VNTDSNRSEVI+
Sbjct: 174 LNVNTDSNRSEVID 187


>ref|XP_002329751.1| predicted protein [Populus trichocarpa] gi|222870659|gb|EEF07790.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  257 bits (656), Expect = 1e-66
 Identities = 128/192 (66%), Positives = 146/192 (76%)
 Frame = +3

Query: 3   EDEKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLLAS 182
           EDEKL+ELVE YGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINR+PFTEEEEERLLAS
Sbjct: 11  EDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLAS 70

Query: 183 HRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKH 362
           HRIHGNRW++IARLFPGRTDNAVKNHWHVIMARR RERSR +AKR AQ+L++ +K  SK 
Sbjct: 71  HRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERSRLHAKRTAQALVNEQKFSSKQ 130

Query: 363 EMGMKIEHRNHSSIREYYERCSDPIIYNHHANLKNIYSPVPNYSPAIDKNDPVEFYDFLQ 542
           +M +  E R+ SS                      +      Y    D+N P+EFYDFLQ
Sbjct: 131 DMQINCETRSFSSFL--------------------LLLMFLTYMAIADQNRPIEFYDFLQ 170

Query: 543 VNTDSNRSEVIN 578
           VNT+SN+SEVI+
Sbjct: 171 VNTESNKSEVID 182


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