BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031209
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525469.1| pentatricopeptide repeat-containing protein,...   259   2e-67
ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|2...   249   2e-64
ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containi...   248   4e-64
ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containi...   245   2e-63
ref|XP_003624580.1| Pentatricopeptide repeat-containing protein ...   240   1e-61

>ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535282|gb|EEF36959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score =  259 bits (661), Expect = 2e-67
 Identities = 124/166 (74%), Positives = 143/166 (86%)
 Frame = -2

Query: 501 LGIKDEKLIQNVEIIVGILSEFESSATEAKGKLEKCGIPSSRELVLEVLSRVRNDWTAAF 322
           L +KDE L+Q+V II+ IL +   +  E K K+E CG+  SRELVLEVLSR+RNDW AAF
Sbjct: 86  LNLKDEGLVQDVTIIMSILHQLSGNPVEMKNKIEHCGVKVSRELVLEVLSRIRNDWEAAF 145

Query: 321 TFFLWAGKQEGYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIM 142
           TFFLWAG+Q GYSHSVREYH+MISILGKMRKFDTAW LI+EMRG K G SLV+PQTLLIM
Sbjct: 146 TFFLWAGRQLGYSHSVREYHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTPQTLLIM 205

Query: 141 IRKYCAVHDVGKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVE 4
           IRKYCAVHDVG+AINTFYAHK+F F++GI+EFQ LLSALCRYKNV+
Sbjct: 206 IRKYCAVHDVGRAINTFYAHKRFKFDLGIDEFQSLLSALCRYKNVQ 251


>ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|222857515|gb|EEE95062.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  249 bits (636), Expect = 2e-64
 Identities = 122/166 (73%), Positives = 140/166 (84%)
 Frame = -2

Query: 501 LGIKDEKLIQNVEIIVGILSEFESSATEAKGKLEKCGIPSSRELVLEVLSRVRNDWTAAF 322
           L + D+ L Q+ + IV IL E   +  E K K+E+CGI  S+ELVLEVLSRVRNDW AAF
Sbjct: 14  LNLSDDGLFQDAKTIVNILQESCDNRVEMKSKIEQCGIKVSQELVLEVLSRVRNDWEAAF 73

Query: 321 TFFLWAGKQEGYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIM 142
           TFFLWA +Q GY+HSVREYHSMISILGKMRKFDTAW LI+EMRG K G SLV+PQTLLIM
Sbjct: 74  TFFLWAARQPGYAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIM 133

Query: 141 IRKYCAVHDVGKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVE 4
           IRKYCAVHDVG+AINTFYA+K+F F++GIEEFQ LLSALCRYKNV+
Sbjct: 134 IRKYCAVHDVGRAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQ 179


>ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 516

 Score =  248 bits (633), Expect = 4e-64
 Identities = 117/166 (70%), Positives = 139/166 (83%)
 Frame = -2

Query: 501 LGIKDEKLIQNVEIIVGILSEFESSATEAKGKLEKCGIPSSRELVLEVLSRVRNDWTAAF 322
           L  +D++L Q+V+ I+ I+ E  S  ++ K KLE C +  S +LV+EVL R RNDW AAF
Sbjct: 21  LRFRDDRLSQDVKTILDIMHEMGSGPSQTKQKLEHCSVDLSAKLVVEVLLRTRNDWEAAF 80

Query: 321 TFFLWAGKQEGYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIM 142
           TFFLWAGKQ GY+HS+REYHSMISILGKMRKFDTAWNLI EMR G+ GPSLV+PQTLLIM
Sbjct: 81  TFFLWAGKQPGYAHSIREYHSMISILGKMRKFDTAWNLIEEMRRGRTGPSLVTPQTLLIM 140

Query: 141 IRKYCAVHDVGKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVE 4
           IRKYCAVHDV +AINTFYA+KQFNF++G+EEF  LLSALCRYKNV+
Sbjct: 141 IRKYCAVHDVARAINTFYAYKQFNFQVGLEEFHSLLSALCRYKNVQ 186


>ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 612

 Score =  245 bits (626), Expect = 2e-63
 Identities = 119/166 (71%), Positives = 139/166 (83%)
 Frame = -2

Query: 501 LGIKDEKLIQNVEIIVGILSEFESSATEAKGKLEKCGIPSSRELVLEVLSRVRNDWTAAF 322
           L ++D+ L ++V+ I+ I+ E  S  ++ K KLE C I  S ELV+EVLSR RNDW AAF
Sbjct: 117 LHLRDDGLAKDVKTILAIMHEVGSGPSQIKQKLEHCSIVLSPELVVEVLSRTRNDWEAAF 176

Query: 321 TFFLWAGKQEGYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIM 142
           TFFLWAGKQ GY+HSVREYHSMISILGKMRKFDTAWNLI EMRGG+ G SLV+PQTLLIM
Sbjct: 177 TFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEEMRGGRNGLSLVTPQTLLIM 236

Query: 141 IRKYCAVHDVGKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVE 4
           IRKYCAVHDV +AINTFYA+K+FNF +G+EEF  LLSALCRYKNV+
Sbjct: 237 IRKYCAVHDVARAINTFYAYKRFNFRVGLEEFHSLLSALCRYKNVQ 282


>ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499595|gb|AES80798.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  240 bits (612), Expect = 1e-61
 Identities = 114/166 (68%), Positives = 138/166 (83%)
 Frame = -2

Query: 501 LGIKDEKLIQNVEIIVGILSEFESSATEAKGKLEKCGIPSSRELVLEVLSRVRNDWTAAF 322
           L ++D+  +++V+ I+ I+ +  S   E K KLE C + +S ELV+EVLSRVRNDW AAF
Sbjct: 90  LHLRDDGFVKDVKTILDIIHKPGSGPYEIKQKLEDCNVKASSELVVEVLSRVRNDWEAAF 149

Query: 321 TFFLWAGKQEGYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIM 142
           TFFLWAGKQ GY HSVREYHSMIS+LGKMR+FDTAW L+ EMR GK G S+V+PQTLLIM
Sbjct: 150 TFFLWAGKQPGYDHSVREYHSMISVLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIM 209

Query: 141 IRKYCAVHDVGKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVE 4
           IRKYCAVHDVG+AINTFYA K+FNF++G+ EFQ LLSALCRYKNV+
Sbjct: 210 IRKYCAVHDVGRAINTFYAFKRFNFQVGLYEFQGLLSALCRYKNVQ 255