BLASTX nr result

ID: Coptis24_contig00031186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031186
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519048.1| PREDICTED: protein cornichon homolog 1-like ...   143   2e-32
ref|NP_001236580.1| uncharacterized protein LOC100500341 precurs...   143   2e-32
ref|XP_002442194.1| hypothetical protein SORBIDRAFT_08g016180 [S...   133   1e-29
gb|ACN34920.1| unknown [Zea mays] gi|413941974|gb|AFW74623.1| ER...   132   3e-29
gb|ABK26736.1| unknown [Picea sitchensis]                             132   3e-29

>ref|XP_003519048.1| PREDICTED: protein cornichon homolog 1-like [Glycine max]
          Length = 149

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/139 (51%), Positives = 92/139 (66%)
 Frame = -3

Query: 421 MSWELVQLFGYTIVFIAVGTLIYANLHQIFLLEDLESDYINPYDLVACINFIVTKEFLVQ 242
           M W L  LF   I F A   L+ +  +Q+ +L DLESDYINP+D  + IN+ V  E++ Q
Sbjct: 1   MGWNL--LFWLVICFPANIALLASTFYQVLILSDLESDYINPFDAASRINYFVLPEYVGQ 58

Query: 241 GALCILFLLTQHWFMLLLSAPVTYYHFRLYKKRKHLIDVTEAFTVLSFERHYRLVKLGFY 62
           GALC L L T HWFM LL+ PVT YH RLY KR+HLIDVTE F VL+ E+ YR+ KL  Y
Sbjct: 59  GALCALCLFTGHWFMFLLTVPVTCYHLRLYVKREHLIDVTEVFRVLNAEKKYRIAKLALY 118

Query: 61  VTLCLTLMFSLTATAAHLI 5
           +T+ +  +F LT TA + +
Sbjct: 119 LTVLIVTIFRLTLTAVYYL 137


>ref|NP_001236580.1| uncharacterized protein LOC100500341 precursor [Glycine max]
           gi|255630079|gb|ACU15393.1| unknown [Glycine max]
          Length = 149

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/139 (51%), Positives = 92/139 (66%)
 Frame = -3

Query: 421 MSWELVQLFGYTIVFIAVGTLIYANLHQIFLLEDLESDYINPYDLVACINFIVTKEFLVQ 242
           M W L  LF   I F +   L+ +  +Q+ +L DLESDYINP+D  + IN+ V  EF+ Q
Sbjct: 1   MGWNL--LFWLAICFPSNIALLASTFYQVLILSDLESDYINPFDAASRINYFVLPEFVGQ 58

Query: 241 GALCILFLLTQHWFMLLLSAPVTYYHFRLYKKRKHLIDVTEAFTVLSFERHYRLVKLGFY 62
           GALC L L T HWFM LL+ PVT YH RLY KR+HLIDVTE F VL+ E+ YR+ KL  Y
Sbjct: 59  GALCALCLFTGHWFMFLLTVPVTCYHLRLYVKREHLIDVTEVFRVLNAEKKYRIAKLALY 118

Query: 61  VTLCLTLMFSLTATAAHLI 5
           +T+ +  +F LT TA + +
Sbjct: 119 LTVLIVTIFRLTLTAVYYL 137


>ref|XP_002442194.1| hypothetical protein SORBIDRAFT_08g016180 [Sorghum bicolor]
           gi|241942887|gb|EES16032.1| hypothetical protein
           SORBIDRAFT_08g016180 [Sorghum bicolor]
          Length = 149

 Score =  133 bits (335), Expect = 1e-29
 Identities = 71/141 (50%), Positives = 89/141 (63%), Gaps = 1/141 (0%)
 Frame = -3

Query: 421 MSWELVQ-LFGYTIVFIAVGTLIYANLHQIFLLEDLESDYINPYDLVACINFIVTKEFLV 245
           MS ELV  LF +  V + +G   Y    Q+  L DLE DYINPYD  + IN +V  E+ +
Sbjct: 1   MSVELVLWLFSFASVMVLIGLTAY----QLICLSDLEYDYINPYDSSSRINAVVLIEYSL 56

Query: 244 QGALCILFLLTQHWFMLLLSAPVTYYHFRLYKKRKHLIDVTEAFTVLSFERHYRLVKLGF 65
           QGALC  FLLT HWF  L+ APVTYYH +LY  RKHL+DVTE F  LS E+ YR++KL F
Sbjct: 57  QGALCASFLLTLHWFPFLVMAPVTYYHVKLYLARKHLVDVTEIFRQLSDEKKYRMIKLAF 116

Query: 64  YVTLCLTLMFSLTATAAHLIV 2
           Y  L +  ++ L  TA  L +
Sbjct: 117 YFCLFIITIYRLVMTAVMLFI 137


>gb|ACN34920.1| unknown [Zea mays] gi|413941974|gb|AFW74623.1| ER-derived vesicles
           protein ERV14 [Zea mays]
          Length = 149

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/135 (48%), Positives = 86/135 (63%)
 Frame = -3

Query: 406 VQLFGYTIVFIAVGTLIYANLHQIFLLEDLESDYINPYDLVACINFIVTKEFLVQGALCI 227
           V+L  +   F++V  LI    +Q+  L DLE DYINPYD  + IN +V  E+ +QGALC 
Sbjct: 3   VELILWLFSFVSVMVLIGLTAYQLICLSDLEYDYINPYDSSSRINAVVLIEYSLQGALCA 62

Query: 226 LFLLTQHWFMLLLSAPVTYYHFRLYKKRKHLIDVTEAFTVLSFERHYRLVKLGFYVTLCL 47
            FLLT HWF  L+  PVTYYH +LY  RKHL+DVTE F  LS E+ YR++KL FY  L +
Sbjct: 63  SFLLTLHWFPFLVMTPVTYYHVKLYLARKHLVDVTEIFRQLSDEKKYRMIKLAFYFCLFI 122

Query: 46  TLMFSLTATAAHLIV 2
             ++ L  TA  L +
Sbjct: 123 ITIYRLVMTAVMLFI 137


>gb|ABK26736.1| unknown [Picea sitchensis]
          Length = 149

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/136 (46%), Positives = 94/136 (69%), Gaps = 1/136 (0%)
 Frame = -3

Query: 421 MSWE-LVQLFGYTIVFIAVGTLIYANLHQIFLLEDLESDYINPYDLVACINFIVTKEFLV 245
           M+WE L+ L  +  V   +G ++Y    Q+  L DLE DYINPYD  + IN +V  EF++
Sbjct: 1   MAWEVLLWLLSFIFVIALLGFVVY----QLICLSDLEFDYINPYDSTSRINRLVIPEFMI 56

Query: 244 QGALCILFLLTQHWFMLLLSAPVTYYHFRLYKKRKHLIDVTEAFTVLSFERHYRLVKLGF 65
           QG LC+LFLLT  WFM L++AP+ YYH +LY +RKHL+DVTE F +L+ E+ YR++KL +
Sbjct: 57  QGVLCLLFLLTGCWFMCLITAPLVYYHAQLYVRRKHLVDVTEIFNLLNAEKKYRMIKLVY 116

Query: 64  YVTLCLTLMFSLTATA 17
           Y+ L   +++ L +++
Sbjct: 117 YLILFFIVIYRLVSSS 132


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