BLASTX nr result

ID: Coptis24_contig00031171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031171
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167908.1| PREDICTED: pre-mRNA-splicing factor 38B-like...    60   2e-07
ref|XP_004149874.1| PREDICTED: uncharacterized protein LOC101215...    60   2e-07
ref|XP_003519321.1| PREDICTED: uncharacterized protein LOC100788...    60   2e-07
gb|ACU19366.1| unknown [Glycine max]                                   60   2e-07
ref|XP_002305255.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_004167908.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Cucumis sativus]
          Length = 370

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +1

Query: 1   GFLYLRYAADPKTLWGWFEPYVKDDE 78
           GFLYLRY ADPKTLW WFEPYVKDDE
Sbjct: 30  GFLYLRYVADPKTLWNWFEPYVKDDE 55


>ref|XP_004149874.1| PREDICTED: uncharacterized protein LOC101215555 [Cucumis sativus]
          Length = 438

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +1

Query: 1   GFLYLRYAADPKTLWGWFEPYVKDDE 78
           GFLYLRY ADPKTLW WFEPYVKDDE
Sbjct: 98  GFLYLRYVADPKTLWNWFEPYVKDDE 123


>ref|XP_003519321.1| PREDICTED: uncharacterized protein LOC100788237 [Glycine max]
          Length = 428

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +1

Query: 1   GFLYLRYAADPKTLWGWFEPYVKDDE 78
           GFLYLRY ADPKTLW WFEPYVKDDE
Sbjct: 98  GFLYLRYCADPKTLWNWFEPYVKDDE 123


>gb|ACU19366.1| unknown [Glycine max]
          Length = 189

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +1

Query: 1   GFLYLRYAADPKTLWGWFEPYVKDDE 78
           GFLYLRY ADPKTLW WFEPYVKDDE
Sbjct: 98  GFLYLRYCADPKTLWNWFEPYVKDDE 123


>ref|XP_002305255.1| predicted protein [Populus trichocarpa] gi|222848219|gb|EEE85766.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = +1

Query: 1   GFLYLRYAADPKTLWGWFEPYVKDDE 78
           GFLYLRYA DPKTLW WFEPY+KDDE
Sbjct: 98  GFLYLRYAGDPKTLWNWFEPYIKDDE 123


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