BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031143
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173517.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
gb|AAS80150.1| ACT11D09.4 [Cucumis melo]                               84   2e-14
ref|NP_001055326.1| Os05g0365500 [Oryza sativa Japonica Group] g...    83   3e-14
ref|XP_003567254.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13

>ref|XP_004173517.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like, partial [Cucumis sativus]
          Length = 215

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/102 (43%), Positives = 64/102 (62%)
 Frame = +2

Query: 71  LGLNKVIMAVIDSGDLDAASNIARDAVTISNIVPTWLTCYNLLRSMFLAGRYEDGVTLFD 250
           L L+  + ++I +GDLDAAS++AR +V  SN  PT  TC  ++ +M+ A RY D + LF 
Sbjct: 109 LNLHNRVQSLIRAGDLDAASSVARHSV-FSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQ 167

Query: 251 FFDNNKTIRNDYVTIAIYNLLIKAHCDAGHVDKALQLYNYVL 376
           FF N   I  + V+   YN LI AHCD G VD  L++Y +++
Sbjct: 168 FFFNQSNIVPNVVS---YNNLINAHCDEGRVDVGLEVYRHII 206


>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 871

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/102 (43%), Positives = 64/102 (62%)
 Frame = +2

Query: 71  LGLNKVIMAVIDSGDLDAASNIARDAVTISNIVPTWLTCYNLLRSMFLAGRYEDGVTLFD 250
           L L+  + ++I +GDLDAAS++AR +V  SN  PT  TC  ++ +M+ A RY D + LF 
Sbjct: 83  LNLHNRVQSLIRAGDLDAASSVARHSV-FSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQ 141

Query: 251 FFDNNKTIRNDYVTIAIYNLLIKAHCDAGHVDKALQLYNYVL 376
           FF N   I  + V+   YN LI AHCD G VD  L++Y +++
Sbjct: 142 FFFNQSNIVPNVVS---YNNLINAHCDEGRVDVGLEVYRHII 180


>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
          Length = 896

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/102 (43%), Positives = 64/102 (62%)
 Frame = +2

Query: 71  LGLNKVIMAVIDSGDLDAASNIARDAVTISNIVPTWLTCYNLLRSMFLAGRYEDGVTLFD 250
           L L+  + ++I +GDLDAAS++AR +V  SN  PT  TC  ++ +M+ A RY D + LF 
Sbjct: 109 LNLHNRVQSLIRAGDLDAASSVARHSV-FSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQ 167

Query: 251 FFDNNKTIRNDYVTIAIYNLLIKAHCDAGHVDKALQLYNYVL 376
           FF N   I  + V+   YN LI AHCD G VD  L++Y +++
Sbjct: 168 FFFNQSNIVPNVVS---YNNLINAHCDEGRVDVGLEVYRHII 206


>ref|NP_001055326.1| Os05g0365500 [Oryza sativa Japonica Group]
           gi|46063434|gb|AAS79737.1| putative pentatricopeptide
           (PPR) repeat-containing protein, PF01535 [Oryza sativa
           Japonica Group] gi|54287606|gb|AAV31350.1| putative
           pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group] gi|54291873|gb|AAV32241.1|
           putative pentatricopeptide repeat-containing protein
           [Oryza sativa Japonica Group]
           gi|113578877|dbj|BAF17240.1| Os05g0365500 [Oryza sativa
           Japonica Group]
          Length = 911

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 49/102 (48%), Positives = 63/102 (61%)
 Frame = +2

Query: 71  LGLNKVIMAVIDSGDLDAASNIARDAVTISNIVPTWLTCYNLLRSMFLAGRYEDGVTLFD 250
           L L+  + ++I SGDLD AS  AR AVT S + PT  TC  +  SM  AGR++D V+LFD
Sbjct: 114 LSLHNRVQSLIRSGDLDGASVAARAAVT-SRVRPTVFTCNAVAASMVRAGRHDDAVSLFD 172

Query: 251 FFDNNKTIRNDYVTIAIYNLLIKAHCDAGHVDKALQLYNYVL 376
           FF     I  + V+   YN LI AHC+A  VD ALQ+Y  +L
Sbjct: 173 FFFRRSNIVPNVVS---YNTLILAHCEAARVDSALQVYREML 211


>ref|XP_003567254.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Brachypodium distachyon]
          Length = 761

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/96 (48%), Positives = 61/96 (63%)
 Frame = +2

Query: 71  LGLNKVIMAVIDSGDLDAASNIARDAVTISNIVPTWLTCYNLLRSMFLAGRYEDGVTLFD 250
           L L+  + ++I SGDLD A+ +AR AV+ S + PT  TC  +  SM  AGRY+D V+LFD
Sbjct: 98  LSLHNRVQSLIRSGDLDGATVVARAAVS-SRVRPTVFTCNAVAASMVRAGRYDDAVSLFD 156

Query: 251 FFDNNKTIRNDYVTIAIYNLLIKAHCDAGHVDKALQ 358
           FF     I  + V+   YN LI AHC+A  VDKALQ
Sbjct: 157 FFFRRSNIVPNVVS---YNTLILAHCEADRVDKALQ 189