BLASTX nr result

ID: Coptis24_contig00031142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031142
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534083.1| Rop guanine nucleotide exchange factor, puta...   345   e-136
emb|CBI30469.3| unnamed protein product [Vitis vinifera]              346   e-135
ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange f...   346   e-135
ref|XP_002309095.1| predicted protein [Populus trichocarpa] gi|2...   333   e-134
ref|XP_002323531.1| predicted protein [Populus trichocarpa] gi|2...   338   e-132

>ref|XP_002534083.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223525876|gb|EEF28299.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 673

 Score =  345 bits (886), Expect(2) = e-136
 Identities = 159/188 (84%), Positives = 174/188 (92%)
 Frame = -1

Query: 898 VSEIAMMKERFAKLLLGEDMSGCGKGVCTALAISNAITNLCATLFGQLWRLEPLASEKKS 719
           +SEI MMKERF+KLLLGEDMSGCG GVCTALAISNAITNLCATLFGQLWRLEPL  EKK+
Sbjct: 211 ISEIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATLFGQLWRLEPLPPEKKA 270

Query: 718 MWRREMEWLLCISDHIVELIPSWQTFPDGSRLEVMTCRPRSDLYINLPALRKLDHMLLET 539
           MWRREMEW LC+SDHIVELIPSWQTFPDGS+LEVMTCRPRSDLY+NLPALRKLD+MLLE 
Sbjct: 271 MWRREMEWFLCVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEI 330

Query: 538 LESFSNTEFWYVDQGIFAPEGDGSASFRRPVQRQEEKWWLPVPCVPPCGLHDDSGKHLQH 359
           L+SF NTEFWYVDQGI A E DGS+SFRR +QRQEEKWWLPVP VPPCGLH++S K LQH
Sbjct: 331 LDSFDNTEFWYVDQGILASEADGSSSFRRALQRQEEKWWLPVPRVPPCGLHENSRKELQH 390

Query: 358 KQECTNQI 335
           K++CTNQ+
Sbjct: 391 KRDCTNQM 398



 Score =  166 bits (421), Expect(2) = e-136
 Identities = 80/116 (68%), Positives = 97/116 (83%), Gaps = 4/116 (3%)
 Frame = -2

Query: 336 SMAINTIVLGDMEVPESYLDSLPKNGRASLGDVMHRYITSDQFSPECLLDCLALSSEHQV 157
           +MAIN+I L DMEVPE+YL+ LPKNG+ASLGD+++RYI+SDQF PECLLDCL LSSEHQ 
Sbjct: 402 AMAINSITLADMEVPETYLEGLPKNGKASLGDLIYRYISSDQFLPECLLDCLDLSSEHQA 461

Query: 156 LEIANRVEASMYVWRQRANP----NMNRSSSKSSWGMVKEMMVDVDKRELLADRAE 1
           +E+ANRVEA+ YVWR+R N     N  RS S+SSW +VKE+M D DKR+LLADRAE
Sbjct: 462 IELANRVEAATYVWRKRTNSKPANNTTRSGSRSSWELVKELMTDADKRDLLADRAE 517


>emb|CBI30469.3| unnamed protein product [Vitis vinifera]
          Length = 1231

 Score =  346 bits (888), Expect(2) = e-135
 Identities = 160/188 (85%), Positives = 177/188 (94%)
 Frame = -1

Query: 898  VSEIAMMKERFAKLLLGEDMSGCGKGVCTALAISNAITNLCATLFGQLWRLEPLASEKKS 719
            +S+I MMKERF+KLLLGEDMSGCG GVCTALAISNAITNLCATLFGQLWRLEPL +EKK+
Sbjct: 730  ISDIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATLFGQLWRLEPLPAEKKA 789

Query: 718  MWRREMEWLLCISDHIVELIPSWQTFPDGSRLEVMTCRPRSDLYINLPALRKLDHMLLET 539
            MWRREMEWLLC+SDHIVELIPSWQTFPDGS+LEVMTCRPRSDLYINLPALRKLD+MLLE 
Sbjct: 790  MWRREMEWLLCVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEV 849

Query: 538  LESFSNTEFWYVDQGIFAPEGDGSASFRRPVQRQEEKWWLPVPCVPPCGLHDDSGKHLQH 359
            L+SF +TEFWYVDQGI AP+ DGS+SFRRP+QRQEEKWWLPVP VPP GLH++S K LQH
Sbjct: 850  LDSFEDTEFWYVDQGILAPDTDGSSSFRRPLQRQEEKWWLPVPRVPPGGLHENSRKQLQH 909

Query: 358  KQECTNQI 335
            K++CTNQI
Sbjct: 910  KRDCTNQI 917



 Score =  163 bits (412), Expect(2) = e-135
 Identities = 79/116 (68%), Positives = 99/116 (85%), Gaps = 4/116 (3%)
 Frame = -2

Query: 336  SMAINTIVLGDMEVPESYLDSLPKNGRASLGDVMHRYITSDQFSPECLLDCLALSSEHQV 157
            +MAIN+  L +ME+PESYL+ LPKNG++SLGD++HRY+TSDQFSPE LL CL LSSEHQ 
Sbjct: 921  AMAINSTALAEMEIPESYLEVLPKNGKSSLGDLIHRYVTSDQFSPEYLLACLDLSSEHQA 980

Query: 156  LEIANRVEASMYVWRQRAN----PNMNRSSSKSSWGMVKEMMVDVDKRELLADRAE 1
            LEIANRVEAS+YVWR++ N     N +RS+S+SSW +VK++MVD DKRELLA+RAE
Sbjct: 981  LEIANRVEASVYVWRRKTNSKPISNTSRSTSRSSWEIVKDLMVDADKRELLAERAE 1036



 Score =  268 bits (684), Expect(2) = e-101
 Identities = 128/189 (67%), Positives = 153/189 (80%)
 Frame = -1

Query: 901 KVSEIAMMKERFAKLLLGEDMSGCGKGVCTALAISNAITNLCATLFGQLWRLEPLASEKK 722
           ++SE+ MMK RF++LLLGEDMSG G GVCTALAIS  ITNL ATLFG++W+LEPL   KK
Sbjct: 173 EISEVEMMKARFSRLLLGEDMSGRGIGVCTALAISKGITNLYATLFGKIWKLEPLDPMKK 232

Query: 721 SMWRREMEWLLCISDHIVELIPSWQTFPDGSRLEVMTCRPRSDLYINLPALRKLDHMLLE 542
           +MWRR+ EWLL +SDHIVE  P+WQ FPDGS  EVMTCR R+DLY NLPALRKLD ML+E
Sbjct: 233 AMWRRDKEWLLSVSDHIVEFTPAWQKFPDGSEGEVMTCRLRADLYANLPALRKLDDMLIE 292

Query: 541 TLESFSNTEFWYVDQGIFAPEGDGSASFRRPVQRQEEKWWLPVPCVPPCGLHDDSGKHLQ 362
           TL+SF +TEFWYV+QGI +P+ DGS+S    +  QEEK WLPVP VPP GL ++S KHLQ
Sbjct: 293 TLDSFEDTEFWYVNQGILSPKADGSSSSPGHLHHQEEKCWLPVPHVPPTGLSENSRKHLQ 352

Query: 361 HKQECTNQI 335
            K++ TNQI
Sbjct: 353 QKRDFTNQI 361



 Score =  126 bits (317), Expect(2) = e-101
 Identities = 66/114 (57%), Positives = 84/114 (73%), Gaps = 4/114 (3%)
 Frame = -2

Query: 330 AINTIVLGDMEVPESYLDSLPKNGRASLGDVMHRYITSDQFSPECLLDCLALSSEHQVLE 151
           AIN+  L +MEVPE YL++LPKN RASLGD+++RYITSDQFSPEC+L  L  +SE Q LE
Sbjct: 367 AINSTTLAEMEVPEPYLEALPKNVRASLGDLIYRYITSDQFSPECVLSHLDFTSE-QALE 425

Query: 150 IANRVEASMYVWRQRANPN----MNRSSSKSSWGMVKEMMVDVDKRELLADRAE 1
           +ANRVEAS+ VW QR  P      ++ +S+ SW   KE+M D DK E +A+RAE
Sbjct: 426 VANRVEASIIVWHQRHYPKPVSIKSQPTSRQSWKAEKELMADADKTESIAERAE 479


>ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis
           vinifera]
          Length = 701

 Score =  346 bits (888), Expect(2) = e-135
 Identities = 160/188 (85%), Positives = 177/188 (94%)
 Frame = -1

Query: 898 VSEIAMMKERFAKLLLGEDMSGCGKGVCTALAISNAITNLCATLFGQLWRLEPLASEKKS 719
           +S+I MMKERF+KLLLGEDMSGCG GVCTALAISNAITNLCATLFGQLWRLEPL +EKK+
Sbjct: 200 ISDIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATLFGQLWRLEPLPAEKKA 259

Query: 718 MWRREMEWLLCISDHIVELIPSWQTFPDGSRLEVMTCRPRSDLYINLPALRKLDHMLLET 539
           MWRREMEWLLC+SDHIVELIPSWQTFPDGS+LEVMTCRPRSDLYINLPALRKLD+MLLE 
Sbjct: 260 MWRREMEWLLCVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEV 319

Query: 538 LESFSNTEFWYVDQGIFAPEGDGSASFRRPVQRQEEKWWLPVPCVPPCGLHDDSGKHLQH 359
           L+SF +TEFWYVDQGI AP+ DGS+SFRRP+QRQEEKWWLPVP VPP GLH++S K LQH
Sbjct: 320 LDSFEDTEFWYVDQGILAPDTDGSSSFRRPLQRQEEKWWLPVPRVPPGGLHENSRKQLQH 379

Query: 358 KQECTNQI 335
           K++CTNQI
Sbjct: 380 KRDCTNQI 387



 Score =  163 bits (412), Expect(2) = e-135
 Identities = 79/116 (68%), Positives = 99/116 (85%), Gaps = 4/116 (3%)
 Frame = -2

Query: 336 SMAINTIVLGDMEVPESYLDSLPKNGRASLGDVMHRYITSDQFSPECLLDCLALSSEHQV 157
           +MAIN+  L +ME+PESYL+ LPKNG++SLGD++HRY+TSDQFSPE LL CL LSSEHQ 
Sbjct: 391 AMAINSTALAEMEIPESYLEVLPKNGKSSLGDLIHRYVTSDQFSPEYLLACLDLSSEHQA 450

Query: 156 LEIANRVEASMYVWRQRAN----PNMNRSSSKSSWGMVKEMMVDVDKRELLADRAE 1
           LEIANRVEAS+YVWR++ N     N +RS+S+SSW +VK++MVD DKRELLA+RAE
Sbjct: 451 LEIANRVEASVYVWRRKTNSKPISNTSRSTSRSSWEIVKDLMVDADKRELLAERAE 506


>ref|XP_002309095.1| predicted protein [Populus trichocarpa] gi|222855071|gb|EEE92618.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score =  333 bits (854), Expect(2) = e-134
 Identities = 157/186 (84%), Positives = 170/186 (91%)
 Frame = -1

Query: 892 EIAMMKERFAKLLLGEDMSGCGKGVCTALAISNAITNLCATLFGQLWRLEPLASEKKSMW 713
           E  MMKERF+KLLLGEDMSGCG GVCTALAISNAITNLCATLFGQLWRLEPL  EKK+MW
Sbjct: 1   ETEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATLFGQLWRLEPLPLEKKAMW 60

Query: 712 RREMEWLLCISDHIVELIPSWQTFPDGSRLEVMTCRPRSDLYINLPALRKLDHMLLETLE 533
           RREMEWLLC+SDHIVEL+PSWQTFPDGS+LEVMTC PRSDLYINLPALRKLD+MLLE L+
Sbjct: 61  RREMEWLLCVSDHIVELMPSWQTFPDGSKLEVMTCGPRSDLYINLPALRKLDNMLLEILD 120

Query: 532 SFSNTEFWYVDQGIFAPEGDGSASFRRPVQRQEEKWWLPVPCVPPCGLHDDSGKHLQHKQ 353
           SF NTEFWYVDQGI AP+ DGSASFRR +QRQEEKWWLPVP VPP GLH++S K LQHK+
Sbjct: 121 SFDNTEFWYVDQGILAPDTDGSASFRRTLQRQEEKWWLPVPQVPPGGLHENSRKKLQHKR 180

Query: 352 ECTNQI 335
           + TNQI
Sbjct: 181 DSTNQI 186



 Score =  173 bits (438), Expect(2) = e-134
 Identities = 82/116 (70%), Positives = 102/116 (87%), Gaps = 4/116 (3%)
 Frame = -2

Query: 336 SMAINTIVLGDMEVPESYLDSLPKNGRASLGDVMHRYITSDQFSPECLLDCLALSSEHQV 157
           +MAIN+I L +ME+PESYL++LPKNG+ASLGD+++RYI+SDQF PECLLDCL LSSEHQ 
Sbjct: 190 AMAINSITLAEMEIPESYLEALPKNGKASLGDLIYRYISSDQFYPECLLDCLDLSSEHQA 249

Query: 156 LEIANRVEASMYVWRQRAN----PNMNRSSSKSSWGMVKEMMVDVDKRELLADRAE 1
           +E+ANRVEAS+Y+WR+R N     + NRSSSKSSW +VKE+M+D DKRELLADRAE
Sbjct: 250 IELANRVEASIYIWRKRTNYKPASSTNRSSSKSSWELVKELMIDADKRELLADRAE 305


>ref|XP_002323531.1| predicted protein [Populus trichocarpa] gi|222868161|gb|EEF05292.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  338 bits (866), Expect(2) = e-132
 Identities = 157/188 (83%), Positives = 172/188 (91%)
 Frame = -1

Query: 898 VSEIAMMKERFAKLLLGEDMSGCGKGVCTALAISNAITNLCATLFGQLWRLEPLASEKKS 719
           V E  MMKERF+KLLLGEDMSGCG GVCTALAISNAITNLCATLFGQLWRLEPLA EKK+
Sbjct: 5   VVETEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATLFGQLWRLEPLAPEKKA 64

Query: 718 MWRREMEWLLCISDHIVELIPSWQTFPDGSRLEVMTCRPRSDLYINLPALRKLDHMLLET 539
           MWRREMEW LC+SDH+VEL+PSWQTFPDGS+LEVMTCRPRSDLYINLPALRKLD+MLLE 
Sbjct: 65  MWRREMEWFLCVSDHVVELMPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEI 124

Query: 538 LESFSNTEFWYVDQGIFAPEGDGSASFRRPVQRQEEKWWLPVPCVPPCGLHDDSGKHLQH 359
           L+SF NTEFWY+DQGI AP+ DGSASFRR +QRQEEKWWLPVP VPP GLH++S K LQH
Sbjct: 125 LDSFDNTEFWYIDQGILAPDADGSASFRRTLQRQEEKWWLPVPRVPPGGLHENSRKQLQH 184

Query: 358 KQECTNQI 335
           K++ TNQI
Sbjct: 185 KRDSTNQI 192



 Score =  161 bits (408), Expect(2) = e-132
 Identities = 77/116 (66%), Positives = 100/116 (86%), Gaps = 4/116 (3%)
 Frame = -2

Query: 336 SMAINTIVLGDMEVPESYLDSLPKNGRASLGDVMHRYITSDQFSPECLLDCLALSSEHQV 157
           +MAIN+I + DME+PESY+D+LPKNG+ASLGD+++R I+SDQF PECLLDCL LSSE   
Sbjct: 196 AMAINSITISDMEIPESYMDALPKNGKASLGDLIYRCISSDQFYPECLLDCLDLSSELLA 255

Query: 156 LEIANRVEASMYVWRQRANP----NMNRSSSKSSWGMVKEMMVDVDKRELLADRAE 1
           +E+ANRVEAS+Y+WR++ N     + NRSSSKSSW ++KE+M+DVDKR+LLADRAE
Sbjct: 256 IELANRVEASIYMWRKKTNSKPVNSTNRSSSKSSWELMKELMIDVDKRDLLADRAE 311