BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031141
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]          64   1e-08
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   1e-07
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]          59   3e-07
gb|EEE56186.1| hypothetical protein OsJ_05139 [Oryza sativa Japo...    57   2e-06
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    57   2e-06

>gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 673

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/90 (35%), Positives = 49/90 (54%)
 Frame = -1

Query: 272 YILDTYCTASGQEINSSKSQIIHHKKLPXXXXXXXXXXFKIPCTHQFPTYLGVSADLGQR 93
           ++++T+C ASG +IN  KS+ +  K +             I        YLGV+    + 
Sbjct: 34  FLVETFCKASGMKINVEKSKALCSKNVSTTRKEVFTGVSSIRFVQDLGKYLGVTLSHSRV 93

Query: 92  TKSQFQPLIDKFHSKLAGWKGSLLSKPGRL 3
           T+S F  ++DK  S+LA WKGSLL++ GRL
Sbjct: 94  TRSAFNGVLDKIRSRLASWKGSLLNRAGRL 123


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/90 (35%), Positives = 45/90 (50%)
 Frame = -1

Query: 275 KYILDTYCTASGQEINSSKSQIIHHKKLPXXXXXXXXXXFKIPCTHQFPTYLGVSADLGQ 96
           K+ LD +C ASG ++N  KS+I                   +  T  F  YLGV    G+
Sbjct: 706 KWCLDRFCEASGSKVNEDKSKIYFSANTHLDIRDAVCNTLAMEATADFGKYLGVPTINGR 765

Query: 95  RTKSQFQPLIDKFHSKLAGWKGSLLSKPGR 6
            +K ++Q L+D+ + KLAGWK   LS  GR
Sbjct: 766 SSKREYQYLVDRINGKLAGWKTKTLSIAGR 795


>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/89 (34%), Positives = 46/89 (51%)
 Frame = -1

Query: 269  ILDTYCTASGQEINSSKSQIIHHKKLPXXXXXXXXXXFKIPCTHQFPTYLGVSADLGQRT 90
            +L+T+C A G +IN  KS+ +  K +             I        YLGV+    + T
Sbjct: 1035 VLETFCKAYGMKINVEKSKALCSKNVSATRKEVFTGISSIIFVQDLGKYLGVTLSHSRVT 1094

Query: 89   KSQFQPLIDKFHSKLAGWKGSLLSKPGRL 3
            +  F  ++DK  S+LA WKGSLL++ GRL
Sbjct: 1095 RLAFNGVLDKIRSRLASWKGSLLNRAGRL 1123


>gb|EEE56186.1| hypothetical protein OsJ_05139 [Oryza sativa Japonica Group]
          Length = 1394

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = -1

Query: 275 KYILDTYCTASGQEINSSKSQIIHHKKLPXXXXXXXXXXFKIPC-THQFPT-YLGVSADL 102
           K +LD +  ASG ++N  KS I     +             +PC   +FP  YLG+   +
Sbjct: 198 KAVLDLFGAASGLKVNLLKSSIT---PIHCNQQQLDMVSELLPCKVEEFPIIYLGLPLSM 254

Query: 101 GQRTKSQFQPLIDKFHSKLAGWKGSLLSKPGRL 3
            + TK++ QP++DK  SK+AGWK  LLS  GRL
Sbjct: 255 RKPTKAELQPVLDKLASKVAGWKPKLLSPDGRL 287


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/90 (36%), Positives = 43/90 (47%)
 Frame = -1

Query: 275  KYILDTYCTASGQEINSSKSQIIHHKKLPXXXXXXXXXXFKIPCTHQFPTYLGVSADLGQ 96
            K I  TY  ASGQ+IN  KS I    K P            +P       YLG+    G+
Sbjct: 988  KNIFSTYEAASGQKINKDKSAICFSPKSPAAIKEACSAILDMPVVPCHERYLGLPTVSGK 1047

Query: 95   RTKSQFQPLIDKFHSKLAGWKGSLLSKPGR 6
              K  FQ L D+  +++ GW+G LLSK G+
Sbjct: 1048 DKKKLFQSLPDRVWNRVHGWEGKLLSKAGK 1077