BLASTX nr result
ID: Coptis24_contig00031132
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00031132
(315 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFK47245.1| unknown [Medicago truncatula] 84 9e-15
gb|ADD52202.1| ubiquitin [Catharanthus roseus] gi|341869050|gb|A... 84 9e-15
gb|ACJ85658.1| unknown [Medicago truncatula] 84 9e-15
emb|CAI51312.2| polyubiquitin [Capsicum chinense] 84 9e-15
gb|AAC35858.1| polyubiquitin [Capsicum chinense] 84 1e-14
>gb|AFK47245.1| unknown [Medicago truncatula]
Length = 233
Score = 84.3 bits (207), Expect = 9e-15
Identities = 54/104 (51%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Frame = +1
Query: 28 RDKAGISSEERGVIITGKLLEDRRALV--------TLYLVLSFRGGMLTFVNSLAGKTIT 183
+DK GI +++ +I GK LED R L TL+LVL RGGM FV +L GKTIT
Sbjct: 31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 90
Query: 184 WEVESSYTTYNEKTKIQGKEGISDQEMGVIIPDQQGLVYICKQL 315
EVESS T N KTKIQ KEGI PDQQ LV+ KQL
Sbjct: 91 LEVESSDTIDNVKTKIQDKEGIP--------PDQQRLVFAGKQL 126
Score = 81.6 bits (200), Expect = 6e-14
Identities = 51/104 (49%), Positives = 61/104 (58%), Gaps = 8/104 (7%)
Frame = +1
Query: 28 RDKAGISSEERGVIITGKLLEDRRALV--------TLYLVLSFRGGMLTFVNSLAGKTIT 183
+DK GI +++ ++ GK LED R L TL+LVL RGGM FV +L GKTIT
Sbjct: 107 QDKEGIPPDQQRLVFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKALTGKTIT 166
Query: 184 WEVESSYTTYNEKTKIQGKEGISDQEMGVIIPDQQGLVYICKQL 315
EVESS T N K KIQ KEGI PDQQ L++ KQL
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIP--------PDQQRLIFAGKQL 202
>gb|ADD52202.1| ubiquitin [Catharanthus roseus] gi|341869050|gb|AEK98798.1|
ubiquitin [Carthamus tinctorius]
Length = 381
Score = 84.3 bits (207), Expect = 9e-15
Identities = 53/104 (50%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Frame = +1
Query: 28 RDKAGISSEERGVIITGKLLEDRRALV--------TLYLVLSFRGGMLTFVNSLAGKTIT 183
+DK GI +++ +I GK LED R L TL+LVL RGGM FV +L GKTIT
Sbjct: 31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 90
Query: 184 WEVESSYTTYNEKTKIQGKEGISDQEMGVIIPDQQGLVYICKQL 315
EVESS TT N K KIQ KEGI PDQQ L++ KQL
Sbjct: 91 LEVESSDTTDNVKAKIQDKEGIP--------PDQQRLIFAGKQL 126
Score = 82.0 bits (201), Expect = 5e-14
Identities = 52/104 (50%), Positives = 61/104 (58%), Gaps = 8/104 (7%)
Frame = +1
Query: 28 RDKAGISSEERGVIITGKLLEDRRALV--------TLYLVLSFRGGMLTFVNSLAGKTIT 183
+DK GI +++ +I GK LED R L TL+LVL RGGM FV +L GKTIT
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLADCNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 166
Query: 184 WEVESSYTTYNEKTKIQGKEGISDQEMGVIIPDQQGLVYICKQL 315
EVESS T N K KIQ KEGI PDQQ L++ KQL
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIP--------PDQQRLIFAGKQL 202
Score = 82.0 bits (201), Expect = 5e-14
Identities = 52/104 (50%), Positives = 61/104 (58%), Gaps = 8/104 (7%)
Frame = +1
Query: 28 RDKAGISSEERGVIITGKLLEDRRALV--------TLYLVLSFRGGMLTFVNSLAGKTIT 183
+DK GI +++ +I GK LED R L TL+LVL RGGM FV +L GKTIT
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 242
Query: 184 WEVESSYTTYNEKTKIQGKEGISDQEMGVIIPDQQGLVYICKQL 315
EVESS T N K KIQ KEGI PDQQ L++ KQL
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIP--------PDQQRLIFAGKQL 278
Score = 80.5 bits (197), Expect = 1e-13
Identities = 52/104 (50%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Frame = +1
Query: 28 RDKAGISSEERGVIITGKLLEDRRALV--------TLYLVLSFRGGMLTFVNSLAGKTIT 183
+DK GI +++ +I GK LED R L TL+LVL RGGM FV +L GKTIT
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 318
Query: 184 WEVESSYTTYNEKTKIQGKEGISDQEMGVIIPDQQGLVYICKQL 315
EVESS T N K KIQ KEGI PDQQ L+ KQL
Sbjct: 319 LEVESSDTIDNVKAKIQDKEGIP--------PDQQRLILAGKQL 354
>gb|ACJ85658.1| unknown [Medicago truncatula]
Length = 228
Score = 84.3 bits (207), Expect = 9e-15
Identities = 54/104 (51%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Frame = +1
Query: 28 RDKAGISSEERGVIITGKLLEDRRALV--------TLYLVLSFRGGMLTFVNSLAGKTIT 183
+DK GI +++ +I GK LED R L TL+LVL RGGM FV +L GKTIT
Sbjct: 31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 90
Query: 184 WEVESSYTTYNEKTKIQGKEGISDQEMGVIIPDQQGLVYICKQL 315
EVESS T N KTKIQ KEGI PDQQ LV+ KQL
Sbjct: 91 LEVESSDTIDNVKTKIQDKEGIP--------PDQQRLVFAGKQL 126
Score = 77.8 bits (190), Expect = 9e-13
Identities = 48/99 (48%), Positives = 58/99 (58%), Gaps = 8/99 (8%)
Frame = +1
Query: 28 RDKAGISSEERGVIITGKLLEDRRALV--------TLYLVLSFRGGMLTFVNSLAGKTIT 183
+DK GI +++ ++ GK LED R L TL+LVL RGGM FV +L GKTIT
Sbjct: 107 QDKEGIPPDQQRLVFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKALTGKTIT 166
Query: 184 WEVESSYTTYNEKTKIQGKEGISDQEMGVIIPDQQGLVY 300
EVESS T N K KIQ KEGI PDQQ L++
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIP--------PDQQRLIF 197
>emb|CAI51312.2| polyubiquitin [Capsicum chinense]
Length = 153
Score = 84.3 bits (207), Expect = 9e-15
Identities = 53/104 (50%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Frame = +1
Query: 28 RDKAGISSEERGVIITGKLLEDRRALV--------TLYLVLSFRGGMLTFVNSLAGKTIT 183
+DK GI +++ +I GK LED R L TL+LVL FRGGM FV +L GKTIT
Sbjct: 31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRFRGGMQIFVKTLTGKTIT 90
Query: 184 WEVESSYTTYNEKTKIQGKEGISDQEMGVIIPDQQGLVYICKQL 315
EVESS T N K KIQ KEGI PDQQ L++ KQL
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIP--------PDQQRLIFAGKQL 126
>gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 84.0 bits (206), Expect = 1e-14
Identities = 53/104 (50%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Frame = +1
Query: 28 RDKAGISSEERGVIITGKLLEDRRALV--------TLYLVLSFRGGMLTFVNSLAGKTIT 183
+DK GI +++ +I GK LED R L TL+LVL RGGM FV +L GKTIT
Sbjct: 143 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 202
Query: 184 WEVESSYTTYNEKTKIQGKEGISDQEMGVIIPDQQGLVYICKQL 315
EVESS T N KTKIQ KEGI PDQQ L++ KQL
Sbjct: 203 LEVESSDTIDNVKTKIQDKEGIP--------PDQQRLIFAGKQL 238
Score = 82.0 bits (201), Expect = 5e-14
Identities = 52/104 (50%), Positives = 61/104 (58%), Gaps = 8/104 (7%)
Frame = +1
Query: 28 RDKAGISSEERGVIITGKLLEDRRALV--------TLYLVLSFRGGMLTFVNSLAGKTIT 183
+DK GI +++ +I GK LED R L TL+LVL RGGM FV +L GKTIT
Sbjct: 67 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 126
Query: 184 WEVESSYTTYNEKTKIQGKEGISDQEMGVIIPDQQGLVYICKQL 315
EVESS T N K KIQ KEGI PDQQ L++ KQL
Sbjct: 127 LEVESSDTIDNVKAKIQDKEGIP--------PDQQRLIFAGKQL 162
Score = 73.6 bits (179), Expect = 2e-11
Identities = 48/92 (52%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Frame = +1
Query: 64 VIITGKLLEDRRALV--------TLYLVLSFRGGMLTFVNSLAGKTITWEVESSYTTYNE 219
+I GK LED R L TL+LVL RGGM FV +L GKTIT EVESS T N
Sbjct: 3 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 62
Query: 220 KTKIQGKEGISDQEMGVIIPDQQGLVYICKQL 315
K KIQ KEGI PDQQ L++ KQL
Sbjct: 63 KAKIQDKEGIP--------PDQQRLIFAGKQL 86