BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031115
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...   103   6e-20
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   102   1e-19
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...    96   9e-18
ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    95   2e-17
ref|XP_003588679.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    94   3e-17

>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  103 bits (256), Expect = 6e-20
 Identities = 75/227 (33%), Positives = 115/227 (50%), Gaps = 11/227 (4%)
 Frame = +2

Query: 161 EGDKLSCLPVELNHMITKRVPVRDIVRTSALSRSWRFGWMSISELVFNARSVPPSVEGQR 340
           E D++S LP  +   I   +P+RD VRTSAL R WR+ W  I  +VF+++ +  S + Q 
Sbjct: 93  ELDRISSLPGHVLGQILSLLPIRDAVRTSALKRKWRYKWSQIPHIVFDSQGISISSQDQT 152

Query: 341 --KRKCVDFINHVRLLHNGTIS*FEIKTTWFVVDLMLINGCSCLQENWQVNSS*SST--- 505
             K K V+ I+H+ LLHNG I  F++       DL+ ++      + W ++ S  ST   
Sbjct: 153 TIKNKLVNIIDHILLLHNGPIYKFKLSH----CDLLAVSDI----DRWILHLSRGSTKEF 204

Query: 506 -----IGRAIRLLLLSSRVKGLTTLKLHLCKLNLTFDGRGFQSLVDLHLCEVAFRTVTI* 670
                 G+  +L       K L  L+L  C L      +GF++L +L L  V        
Sbjct: 205 VLEIWKGQQYKLPSCLFSFKNLVYLELFNCLLKPPLAFKGFRNLKNLDLQHVTLAQEVFE 264

Query: 671 CIILN-SPLEKLKLISCDGFNRLKLCAPNLRLFHICGYSVMINFSNT 808
            +I + + LE+L LI+ DGF  L + APNL+ F + G    ++F NT
Sbjct: 265 KLISSCAMLERLTLINFDGFTHLNINAPNLQFFDVGGVFDDVSFENT 311


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score =  102 bits (253), Expect = 1e-19
 Identities = 79/229 (34%), Positives = 116/229 (50%), Gaps = 11/229 (4%)
 Frame = +2

Query: 155 QAEGDKLSCLPVELNHMITKRVPVRDIVRTSALSRSWRFGWMSISELVFNAR--SVPPSV 328
           + E D++S LP  +   I  ++ +RD VRTSALSR WR+ W  I  LVF+ +  S+P   
Sbjct: 12  ETELDRISSLPGHVLDQILSQLSIRDAVRTSALSRKWRYKWAKIPHLVFDNKCVSIPSQD 71

Query: 329 EGQRKRKCVDFINHVRLLHNGTIS*FEIKTTWFVVDLMLINGCSCLQENWQVNSS*SS-- 502
           +   K K V+ I+HV LLHNG I  F++       DL+ ++      + W ++ S SS  
Sbjct: 72  QTLIKDKLVNIIDHVLLLHNGPIQKFKLSHR----DLLGVSDI----DRWILHLSRSSIK 123

Query: 503 ----TIGRAIRLLLLSS--RVKGLTTLKLHLCKLNLTFDGRGFQSLVDLHLCEVAFRTVT 664
                I +  R  + SS    + L  L+L  C L      +GF+SL  L L  +      
Sbjct: 124 EFILEIWKGQRYKVPSSLFSFEHLIHLELFNCLLQPPLTFKGFRSLKSLDLQHITLTQNV 183

Query: 665 I*CIILNSP-LEKLKLISCDGFNRLKLCAPNLRLFHICGYSVMINFSNT 808
              +I + P LE+L L++ DGF  L + APNL+ F I G    + F NT
Sbjct: 184 FENLIFSCPLLERLTLMNFDGFTHLNINAPNLQFFDIGGVYDDVTFENT 232


>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 76/227 (33%), Positives = 114/227 (50%), Gaps = 11/227 (4%)
 Frame = +2

Query: 161 EGDKLSCLPVELNHMITKRVPVRDIVRTSALSRSWRFGWMSISELVFNARSVPPSVEGQ- 337
           E D++S LP  +   I   +P+RD VRTSALSR WR+ W  I  LVF+ +    + + Q 
Sbjct: 4   ELDRISSLPGHVLDQILSVLPIRDAVRTSALSRKWRYQWSQIPHLVFDTQCASITSQDQT 63

Query: 338 -RKRKCVDFINHVRLLHNGTIS*FEIKTTWFVVDLMLINGCSCLQENWQVNSS*SST--- 505
             K   V+ I++V LLHNG I  F++       DL+ ++      + W ++ S  ST   
Sbjct: 64  IAKNNLVNIIDNVLLLHNGPIYKFKLSHR----DLLGVSDI----DRWILHLSRGSTKEF 115

Query: 506 -----IGRAIRLLLLSSRVKGLTTLKLHLCKLNLTFDGRGFQSLVDLHLCEVAFRTVTI* 670
                 G+  +L       + LT L+L  C L      +GF++L  L L  V        
Sbjct: 116 VLEIWKGQRYKLPSCLFSFENLTHLELFNCLLKPPPAFKGFRNLKSLDLQHVTLAQEVFE 175

Query: 671 CIILN-SPLEKLKLISCDGFNRLKLCAPNLRLFHICGYSVMINFSNT 808
            +I + + LE+L L++ DGF  LK+ APNL+ F I G    ++F NT
Sbjct: 176 NLISSCALLERLTLMNFDGFTHLKINAPNLQFFDIGGIFDDVSFHNT 222


>ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478059|gb|AES59262.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 528

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 76/237 (32%), Positives = 114/237 (48%), Gaps = 20/237 (8%)
 Frame = +2

Query: 158 AEGDKLSCLPVELNHMITKRVPVRDIVRTSALSRSWRFGWMSISELVFNAR--SVPPSVE 331
           AE D++S LP  +   I   +P+RD VRTS LSR+WR  W ++  LVF+ +   VP +  
Sbjct: 12  AEPDRISWLPGHVIDQIMSYLPIRDAVRTSVLSRNWRKKWYTLPNLVFDTKLVPVPAATS 71

Query: 332 GQR----KRKCVDFINHVRLLHNGTIS*FEIKTTWFVVDLMLINGCSCLQENWQVNSS*S 499
           G        K +  ++HV L+H+G I+ F+      V DLM  +      + W ++    
Sbjct: 72  GDPLAIIDNKFLQIVDHVLLVHSGPINMFKFSN---VDDLMGEDSLVTNIDRWILH---- 124

Query: 500 STIGRAIRLLLLSSRV-------------KGLTTLKLHLCKLNLTFDGRGFQSLVDLHLC 640
             IGR+I+ L+L   +             + L +LKL+ C L       GF++L  L LC
Sbjct: 125 -LIGRSIKELVLEVWIDDYYKLPWCLFSCQSLHSLKLNGCLLKPPTMFEGFRNLKSLDLC 183

Query: 641 EVAFRTVTI*CIILNSP-LEKLKLISCDGFNRLKLCAPNLRLFHICGYSVMINFSNT 808
            V          I   P LEKL+L    G  ++ + APNL+ F I G   ++ F NT
Sbjct: 184 LVNIVQDAFENFISRCPLLEKLRLREFYGLTQINIHAPNLKFFEIVGEFEVVTFGNT 240


>ref|XP_003588679.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477727|gb|AES58930.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 365

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
 Frame = +2

Query: 161 EGDKLSCLPVELNHMITKRVPVRDIVRTSALSRSWRFGWMSISELVFNARSVPPSVEGQR 340
           E D++SCLP ++   I  R+P+RD VRTS LS  WR+ W ++  LVFN + V  +     
Sbjct: 5   EPDRISCLPGDVIDRILLRLPIRDAVRTSVLSNKWRYKWATMPNLVFNKQRVSATAPFVI 64

Query: 341 KRKCVDFINHVRLLHNGTIS*FEIKTTWFVVDLMLINGCSCLQENWQVNSS*SSTIGRAI 520
             K +  I+HV LL++G I+ F++     +    L      L      +     + G++ 
Sbjct: 65  GGKLLAIIDHVLLLYSGPINKFKLSDCGVISVTALDRWIFHLTRRSIKDLVLGISKGQSY 124

Query: 521 RLLLLSSRVKGLTTLKLHLCKLNLTFDGRGFQSLVDLHLCEVAFRTVTI*CIILNSP-LE 697
           ++       + L  L L  C L       GF++L  L L  +         +I   P LE
Sbjct: 125 KIPWCLFSCQSLLHLSLSYCLLKPPSTIEGFKNLKSLKLDHITMSQDDFEILISGCPLLE 184

Query: 698 KLKLISCDGFNRLKLCAPNLRLFHICGYSVMINFSNT 808
           +L LI  DGF ++ + APNL++  I G  V I F  T
Sbjct: 185 RLILIEFDGFTKINIHAPNLKVLAIVGKFVDIRFEKT 221