BLASTX nr result

ID: Coptis24_contig00031113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031113
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298622.1| predicted protein [Populus trichocarpa] gi|2...   228   3e-58
ref|XP_004138615.1| PREDICTED: fidgetin-like protein 1-like [Cuc...   227   9e-58
ref|XP_003633767.1| PREDICTED: fidgetin-like protein 1-like [Vit...   227   9e-58
emb|CBI21358.3| unnamed protein product [Vitis vinifera]              227   9e-58
ref|XP_002509525.1| ATP binding protein, putative [Ricinus commu...   227   9e-58

>ref|XP_002298622.1| predicted protein [Populus trichocarpa] gi|222845880|gb|EEE83427.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  228 bits (582), Expect = 3e-58
 Identities = 116/132 (87%), Positives = 118/132 (89%)
 Frame = +2

Query: 2   EDIAGLDHAKKCVTEMVIWPLLRPDIFKGCRSXXXXXXXXXXXXXXKTMIGKAIAGEAKA 181
           +DIAGLDHAKKCVTEMVIWPLLRPDIFKGCRS              KTMIGKAIAGEAKA
Sbjct: 22  DDIAGLDHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKA 81

Query: 182 TFFYISASSLTSKWIGEGEKLVRALFGVAACRQPAVIFVDEIDSLLSQRKSEGEHESSRR 361
           TFFYISASSLTSKWIGEGEKLVRALFGVA+CRQPAVIFVDEIDSLLSQRKSEGEHESSRR
Sbjct: 82  TFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRR 141

Query: 362 LKTQFLIEMEGF 397
           LKTQFLIEMEGF
Sbjct: 142 LKTQFLIEMEGF 153


>ref|XP_004138615.1| PREDICTED: fidgetin-like protein 1-like [Cucumis sativus]
           gi|449528905|ref|XP_004171442.1| PREDICTED:
           fidgetin-like protein 1-like [Cucumis sativus]
          Length = 677

 Score =  227 bits (578), Expect = 9e-58
 Identities = 115/132 (87%), Positives = 118/132 (89%)
 Frame = +2

Query: 2   EDIAGLDHAKKCVTEMVIWPLLRPDIFKGCRSXXXXXXXXXXXXXXKTMIGKAIAGEAKA 181
           +DIAGL+HAKKCVTEMVIWPLLRPDIFKGCRS              KTMIGKAIAGEAKA
Sbjct: 400 DDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKA 459

Query: 182 TFFYISASSLTSKWIGEGEKLVRALFGVAACRQPAVIFVDEIDSLLSQRKSEGEHESSRR 361
           TFFYISASSLTSKWIGEGEKLVRALFGVA+CRQPAVIFVDEIDSLLSQRKSEGEHESSRR
Sbjct: 460 TFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRR 519

Query: 362 LKTQFLIEMEGF 397
           LKTQFLIEMEGF
Sbjct: 520 LKTQFLIEMEGF 531


>ref|XP_003633767.1| PREDICTED: fidgetin-like protein 1-like [Vitis vinifera]
          Length = 668

 Score =  227 bits (578), Expect = 9e-58
 Identities = 115/132 (87%), Positives = 118/132 (89%)
 Frame = +2

Query: 2   EDIAGLDHAKKCVTEMVIWPLLRPDIFKGCRSXXXXXXXXXXXXXXKTMIGKAIAGEAKA 181
           +DIAGL+HAKKCVTEMVIWPLLRPDIFKGCRS              KTMIGKAIAGEAKA
Sbjct: 391 DDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKA 450

Query: 182 TFFYISASSLTSKWIGEGEKLVRALFGVAACRQPAVIFVDEIDSLLSQRKSEGEHESSRR 361
           TFFYISASSLTSKWIGEGEKLVRALFGVA+CRQPAVIFVDEIDSLLSQRKSEGEHESSRR
Sbjct: 451 TFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRR 510

Query: 362 LKTQFLIEMEGF 397
           LKTQFLIEMEGF
Sbjct: 511 LKTQFLIEMEGF 522


>emb|CBI21358.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  227 bits (578), Expect = 9e-58
 Identities = 115/132 (87%), Positives = 118/132 (89%)
 Frame = +2

Query: 2   EDIAGLDHAKKCVTEMVIWPLLRPDIFKGCRSXXXXXXXXXXXXXXKTMIGKAIAGEAKA 181
           +DIAGL+HAKKCVTEMVIWPLLRPDIFKGCRS              KTMIGKAIAGEAKA
Sbjct: 376 DDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKA 435

Query: 182 TFFYISASSLTSKWIGEGEKLVRALFGVAACRQPAVIFVDEIDSLLSQRKSEGEHESSRR 361
           TFFYISASSLTSKWIGEGEKLVRALFGVA+CRQPAVIFVDEIDSLLSQRKSEGEHESSRR
Sbjct: 436 TFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRR 495

Query: 362 LKTQFLIEMEGF 397
           LKTQFLIEMEGF
Sbjct: 496 LKTQFLIEMEGF 507


>ref|XP_002509525.1| ATP binding protein, putative [Ricinus communis]
           gi|223549424|gb|EEF50912.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 660

 Score =  227 bits (578), Expect = 9e-58
 Identities = 115/132 (87%), Positives = 118/132 (89%)
 Frame = +2

Query: 2   EDIAGLDHAKKCVTEMVIWPLLRPDIFKGCRSXXXXXXXXXXXXXXKTMIGKAIAGEAKA 181
           +DIAGL+HAKKCVTEMVIWPLLRPDIFKGCRS              KTMIGKAIAGEAKA
Sbjct: 383 DDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKA 442

Query: 182 TFFYISASSLTSKWIGEGEKLVRALFGVAACRQPAVIFVDEIDSLLSQRKSEGEHESSRR 361
           TFFYISASSLTSKWIGEGEKLVRALFGVA+CRQPAVIFVDEIDSLLSQRKSEGEHESSRR
Sbjct: 443 TFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRR 502

Query: 362 LKTQFLIEMEGF 397
           LKTQFLIEMEGF
Sbjct: 503 LKTQFLIEMEGF 514


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