BLASTX nr result

ID: Coptis24_contig00031083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031083
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonin...    87   1e-15
gb|ABF72006.1| leucine-rich repeat-containing protein kinase fam...    84   9e-15
emb|CBI21262.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002512822.1| ATP binding protein, putative [Ricinus commu...    80   2e-13
ref|XP_003624516.1| Receptor-like-kinase [Medicago truncatula] g...    78   6e-13

>ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2
           [Vitis vinifera] gi|147802220|emb|CAN68268.1|
           hypothetical protein VITISV_029909 [Vitis vinifera]
          Length = 1066

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 17/127 (13%)
 Frame = +3

Query: 111 AVLTFLILCSPLFFLSNPVTSIPQEAMSLLAFKKSISVDPFRLLLDWNVTNNYCSWYGVT 290
           AVL  L+  S  F  S+ V S+ ++AM LL+FK SIS+DP  LL DWN++ N+C WYGVT
Sbjct: 2   AVLWILVF-SLSFAFSHAVASVSRDAMLLLSFKSSISLDPASLLSDWNLSTNHCHWYGVT 60

Query: 291 CT--DKRVTSLNI---------------XXXXXXXXXXXXAAEVGNLTELRALSLPHNNF 419
           C     RV +L+I                           +A +G L+ELR LS+PHN F
Sbjct: 61  CDRFSGRVVALSITGSMSSSGLPELGYNFTGKDSVLVGTLSASIGGLSELRILSIPHNVF 120

Query: 420 TGNIPVE 440
           +G IP +
Sbjct: 121 SGEIPAD 127


>gb|ABF72006.1| leucine-rich repeat-containing protein kinase family protein [Musa
           acuminata]
          Length = 1053

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
 Frame = +3

Query: 117 LTFLILCSPLFFLSNPVTSIPQEAMS----LLAFKKSISVDPFRLLLDWN-VTNNYCSWY 281
           + FLI+ +  F L  P +  P  A +    LLAFK S+++DP  LL  W+ V   +C+W 
Sbjct: 1   MAFLIVLALSFSLLAPSSPSPGPASTDQAALLAFKSSVALDPASLLSGWSPVARRHCTWR 60

Query: 282 GVTC--TDKRVTSLNIXXXXXXXXXXXXAAEVGNLTELRALSLPHNNFTGNIP 434
           GVTC     RVT+LN+            AA +GNLTELR LSLPHN F+G+IP
Sbjct: 61  GVTCDAVSGRVTALNLTGTPSSPLSGRLAAALGNLTELRVLSLPHNAFSGDIP 113


>emb|CBI21262.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/108 (44%), Positives = 62/108 (57%)
 Frame = +3

Query: 111 AVLTFLILCSPLFFLSNPVTSIPQEAMSLLAFKKSISVDPFRLLLDWNVTNNYCSWYGVT 290
           AVL  L+  S  F  S+ V S+ ++AM LL+FK SIS+DP  LL DWN++ N+C WYGVT
Sbjct: 2   AVLWILVF-SLSFAFSHAVASVSRDAMLLLSFKSSISLDPASLLSDWNLSTNHCHWYGVT 60

Query: 291 CTDKRVTSLNIXXXXXXXXXXXXAAEVGNLTELRALSLPHNNFTGNIP 434
           C D+    L I             A+V  L +L  L L  NNF+G IP
Sbjct: 61  C-DRFSGRLRILSIPHNVFSGEIPADVAKLHKLEILQLQGNNFSGRIP 107


>ref|XP_002512822.1| ATP binding protein, putative [Ricinus communis]
           gi|223547833|gb|EEF49325.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1050

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
 Frame = +3

Query: 183 EAMSLLAFKKSISVDPFRLLLDWNVTNNYCSWYGVTCTD--KRVTSLNIXXXXXXXXXXX 356
           +  +LL F+KS+S DP  LL  W   ++YCSWYGVTC +  KRV +LN            
Sbjct: 27  DTAALLDFRKSVSRDPSNLLAGWTPNSDYCSWYGVTCNEVSKRVVALNFTSRSLTSFLAG 86

Query: 357 XAAE-VGNLTELRALSLPHNNFTGNIPV 437
              + VGNLTELRAL +P N F+G+IPV
Sbjct: 87  TLPDSVGNLTELRALVIPQNAFSGDIPV 114


>ref|XP_003624516.1| Receptor-like-kinase [Medicago truncatula]
           gi|355499531|gb|AES80734.1| Receptor-like-kinase
           [Medicago truncatula]
          Length = 1131

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 50/120 (41%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
 Frame = +3

Query: 102 KMAAVLTFLILCSPLFFLSNPVT----SIPQEAMSLLAFKKSISVDPFRLLLDWNVTNN- 266
           KM      L+LC  LFF ++       SIP +A+SLL FK+ +S DP  LL  W+  ++ 
Sbjct: 67  KMGHHFLHLLLCL-LFFTTHHANAFNPSIPNDALSLLTFKRFVSSDPSNLLSGWSHRSSL 125

Query: 267 -YCSWYGVTC--TDKRVTSLNIXXXXXXXXXXXXAAEVGNLTELRALSLPHNNFTGNIPV 437
            +C+W+GVTC   D RVT LN+             +++GNL+ELR LSL  N F+G IPV
Sbjct: 126 KFCNWHGVTCGGGDGRVTELNV----TGLRGGELLSDIGNLSELRILSLSGNMFSGEIPV 181


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