BLASTX nr result

ID: Coptis24_contig00031072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031072
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263738.1| PREDICTED: DNA replication licensing factor ...   136   2e-30
ref|XP_003593231.1| DNA replication licensing factor MCM9 [Medic...   132   2e-30
ref|XP_002525825.1| Minichromosome maintenance protein MCM, puta...   136   2e-30
ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis s...   134   1e-29
ref|XP_002325759.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29

>ref|XP_002263738.1| PREDICTED: DNA replication licensing factor MCM9-like [Vitis
           vinifera]
          Length = 644

 Score =  136 bits (343), Expect = 2e-30
 Identities = 70/74 (94%), Positives = 71/74 (95%)
 Frame = -3

Query: 362 SATDNAARTTVRMLESLIRLAQAHARLMFRHEVTRLDAIAAILCIESSMTTSAIVDSVGN 183
           SAT NAARTTVRMLESLIRLAQAHARLMFR+EVTRLDAI AILCIESSMTTSAIVDSVGN
Sbjct: 563 SATHNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCIESSMTTSAIVDSVGN 622

Query: 182 ALHSNFTENPDHEC 141
           ALHSNFTENPD EC
Sbjct: 623 ALHSNFTENPDQEC 636


>ref|XP_003593231.1| DNA replication licensing factor MCM9 [Medicago truncatula]
           gi|355482279|gb|AES63482.1| DNA replication licensing
           factor MCM9 [Medicago truncatula]
          Length = 484

 Score =  132 bits (333), Expect(2) = 2e-30
 Identities = 66/74 (89%), Positives = 70/74 (94%)
 Frame = -3

Query: 362 SATDNAARTTVRMLESLIRLAQAHARLMFRHEVTRLDAIAAILCIESSMTTSAIVDSVGN 183
           SAT NAARTTVRMLESLIRLAQAHARLMFR+EVTRLDAI A+LCIESSMTTSAIVD +GN
Sbjct: 374 SATHNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAVLCIESSMTTSAIVDCIGN 433

Query: 182 ALHSNFTENPDHEC 141
           ALHSNFT+NPD EC
Sbjct: 434 ALHSNFTDNPDQEC 447



 Score = 24.6 bits (52), Expect(2) = 2e-30
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 57  FLTIYHIDAKQETLILEK 4
           FL I   DAKQE LIL+K
Sbjct: 452 FLCIITTDAKQERLILQK 469


>ref|XP_002525825.1| Minichromosome maintenance protein MCM, putative [Ricinus communis]
           gi|223534830|gb|EEF36519.1| Minichromosome maintenance
           protein MCM, putative [Ricinus communis]
          Length = 644

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = -3

Query: 362 SATDNAARTTVRMLESLIRLAQAHARLMFRHEVTRLDAIAAILCIESSMTTSAIVDSVGN 183
           SATDNAARTTVRMLESLIRLAQAHARLMFR+EVT LDAI AILCIESSMTTSAIVDS+GN
Sbjct: 568 SATDNAARTTVRMLESLIRLAQAHARLMFRNEVTTLDAIMAILCIESSMTTSAIVDSIGN 627

Query: 182 ALHSNFTENPDHEC 141
           ALHSNFTENPD EC
Sbjct: 628 ALHSNFTENPDQEC 641


>ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis sativus]
          Length = 649

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/74 (91%), Positives = 70/74 (94%)
 Frame = -3

Query: 362 SATDNAARTTVRMLESLIRLAQAHARLMFRHEVTRLDAIAAILCIESSMTTSAIVDSVGN 183
           SA DNAARTTVRMLESLIRLAQAHARLMFR+EVTRLDAI AILCIESSM TSA+VDSVGN
Sbjct: 570 SAMDNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCIESSMMTSALVDSVGN 629

Query: 182 ALHSNFTENPDHEC 141
           ALHSNFTENPD EC
Sbjct: 630 ALHSNFTENPDEEC 643


>ref|XP_002325759.1| predicted protein [Populus trichocarpa] gi|222862634|gb|EEF00141.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/74 (91%), Positives = 71/74 (95%)
 Frame = -3

Query: 362 SATDNAARTTVRMLESLIRLAQAHARLMFRHEVTRLDAIAAILCIESSMTTSAIVDSVGN 183
           SAT NAARTTVRMLESLIRLAQAHARLMFR+EVTR+DAI AILCIESSMTTSAIVDSVGN
Sbjct: 629 SATYNAARTTVRMLESLIRLAQAHARLMFRNEVTRIDAIMAILCIESSMTTSAIVDSVGN 688

Query: 182 ALHSNFTENPDHEC 141
           +LHSNFTENPD EC
Sbjct: 689 SLHSNFTENPDEEC 702


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