BLASTX nr result

ID: Coptis24_contig00031061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031061
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302315.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
ref|XP_002284046.1| PREDICTED: queuine tRNA-ribosyltransferase [...   176   2e-42
ref|XP_004160300.1| PREDICTED: queuine tRNA-ribosyltransferase-l...   174   5e-42
ref|XP_004136428.1| PREDICTED: queuine tRNA-ribosyltransferase-l...   174   5e-42
emb|CAN77160.1| hypothetical protein VITISV_006782 [Vitis vinifera]   174   9e-42

>ref|XP_002302315.1| predicted protein [Populus trichocarpa] gi|222844041|gb|EEE81588.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  177 bits (448), Expect = 1e-42
 Identities = 84/92 (91%), Positives = 89/92 (96%)
 Frame = +1

Query: 34  MAISFQVLGRFNRARAAILTLPHFECQTPLFMPVGTQGTIKGLTTNQLEDIGCQIILGNT 213
           MA+ F+VLGRFNRARAA LTLPHF CQTPLFMPVGTQGTIKGLTTNQLE+IGCQIILGNT
Sbjct: 1   MALRFEVLGRFNRARAARLTLPHFVCQTPLFMPVGTQGTIKGLTTNQLEEIGCQIILGNT 60

Query: 214 YHLALRPTSELIDELGGLHKFMHWPRALLTDS 309
           YHLALRPTSELIDELGGLHKFM+WPRA+LTDS
Sbjct: 61  YHLALRPTSELIDELGGLHKFMNWPRAMLTDS 92


>ref|XP_002284046.1| PREDICTED: queuine tRNA-ribosyltransferase [Vitis vinifera]
           gi|302142000|emb|CBI19203.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  176 bits (446), Expect = 2e-42
 Identities = 84/92 (91%), Positives = 89/92 (96%)
 Frame = +1

Query: 34  MAISFQVLGRFNRARAAILTLPHFECQTPLFMPVGTQGTIKGLTTNQLEDIGCQIILGNT 213
           MA+ F+VLGRFNRARAA LTLPHF CQTPLFMPVGTQGTIKGLTTNQLE+IGCQIILGNT
Sbjct: 1   MALRFEVLGRFNRARAAQLTLPHFVCQTPLFMPVGTQGTIKGLTTNQLEEIGCQIILGNT 60

Query: 214 YHLALRPTSELIDELGGLHKFMHWPRALLTDS 309
           YHLALRP+SELIDELGGLHKFM+WPRALLTDS
Sbjct: 61  YHLALRPSSELIDELGGLHKFMNWPRALLTDS 92


>ref|XP_004160300.1| PREDICTED: queuine tRNA-ribosyltransferase-like [Cucumis sativus]
          Length = 468

 Score =  174 bits (442), Expect = 5e-42
 Identities = 82/92 (89%), Positives = 88/92 (95%)
 Frame = +1

Query: 34  MAISFQVLGRFNRARAAILTLPHFECQTPLFMPVGTQGTIKGLTTNQLEDIGCQIILGNT 213
           MA+ F++LGRFNRARAA LTLPHF CQTPLFMPVGTQGTIKGLTT QLE+IGCQIILGNT
Sbjct: 1   MALRFEILGRFNRARAAQLTLPHFTCQTPLFMPVGTQGTIKGLTTQQLEEIGCQIILGNT 60

Query: 214 YHLALRPTSELIDELGGLHKFMHWPRALLTDS 309
           YHLALRPTSELIDELGGLHKFM+WPRA+LTDS
Sbjct: 61  YHLALRPTSELIDELGGLHKFMNWPRAMLTDS 92


>ref|XP_004136428.1| PREDICTED: queuine tRNA-ribosyltransferase-like [Cucumis sativus]
          Length = 413

 Score =  174 bits (442), Expect = 5e-42
 Identities = 82/92 (89%), Positives = 88/92 (95%)
 Frame = +1

Query: 34  MAISFQVLGRFNRARAAILTLPHFECQTPLFMPVGTQGTIKGLTTNQLEDIGCQIILGNT 213
           MA+ F++LGRFNRARAA LTLPHF CQTPLFMPVGTQGTIKGLTT QLE+IGCQIILGNT
Sbjct: 1   MALRFEILGRFNRARAAQLTLPHFTCQTPLFMPVGTQGTIKGLTTQQLEEIGCQIILGNT 60

Query: 214 YHLALRPTSELIDELGGLHKFMHWPRALLTDS 309
           YHLALRPTSELIDELGGLHKFM+WPRA+LTDS
Sbjct: 61  YHLALRPTSELIDELGGLHKFMNWPRAMLTDS 92


>emb|CAN77160.1| hypothetical protein VITISV_006782 [Vitis vinifera]
          Length = 199

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/92 (90%), Positives = 88/92 (95%)
 Frame = +1

Query: 34  MAISFQVLGRFNRARAAILTLPHFECQTPLFMPVGTQGTIKGLTTNQLEDIGCQIILGNT 213
           MA+ F+VLGRFNRARAA LTLPHF CQTPLFMPVGTQGTIKGLTTNQL +IGCQIILGNT
Sbjct: 1   MALRFEVLGRFNRARAAQLTLPHFVCQTPLFMPVGTQGTIKGLTTNQLXEIGCQIILGNT 60

Query: 214 YHLALRPTSELIDELGGLHKFMHWPRALLTDS 309
           YHLALRP+SELIDELGGLHKFM+WPRALLTDS
Sbjct: 61  YHLALRPSSELIDELGGLHKFMNWPRALLTDS 92


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