BLASTX nr result

ID: Coptis24_contig00031055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031055
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268819.1| PREDICTED: uncharacterized protein LOC100256...    96   4e-18
emb|CAN83552.1| hypothetical protein VITISV_027408 [Vitis vinifera]    96   4e-18
ref|XP_002513117.1| conserved hypothetical protein [Ricinus comm...    88   7e-16
ref|XP_002332425.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_003539928.1| PREDICTED: protein IQ-DOMAIN 14-like [Glycin...    80   3e-13

>ref|XP_002268819.1| PREDICTED: uncharacterized protein LOC100256816 [Vitis vinifera]
          Length = 469

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 57/130 (43%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
 Frame = -2

Query: 524 LAGRSSPIXXXXXXXXXXXXXSIEDSDSLGSPVLPNYMSATESVKARLRSISLPKQRQGL 345
           + G  SP+             SI D +S  SP +P YM+ATES KA++RS+S PK R G 
Sbjct: 336 IEGLGSPVLVPRRSFHHRKERSIGDENSFSSPPIPTYMAATESAKAKVRSVSSPKLRPGS 395

Query: 344 VDTYSDHGSPYKDRL-IFSSFSTDASTIVKSGKSPSFQQRSPSLKGLLIPRNSHPSAKDI 168
           +DT+SD  SP+K+RL + SS S++A+   +  K    QQRSPSL+G   P  S  S K++
Sbjct: 396 LDTFSDSNSPHKNRLSLISSISSEATNCSRISKPGMPQQRSPSLRG-PGPIKSSRSTKEL 454

Query: 167 SINSESSILN 138
           S +SE S+LN
Sbjct: 455 SFDSECSLLN 464


>emb|CAN83552.1| hypothetical protein VITISV_027408 [Vitis vinifera]
          Length = 489

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 57/130 (43%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
 Frame = -2

Query: 524 LAGRSSPIXXXXXXXXXXXXXSIEDSDSLGSPVLPNYMSATESVKARLRSISLPKQRQGL 345
           + G  SP+             SI D +S  SP +P YM+ATES KA++RS+S PK R G 
Sbjct: 356 IEGLGSPVLVPRRSFHHRKERSIGDENSFSSPPIPTYMAATESAKAKVRSVSSPKLRPGS 415

Query: 344 VDTYSDHGSPYKDRL-IFSSFSTDASTIVKSGKSPSFQQRSPSLKGLLIPRNSHPSAKDI 168
           +DT+SD  SP+K+RL + SS S++A+   +  K    QQRSPSL+G   P  S  S K++
Sbjct: 416 LDTFSDSNSPHKNRLSLISSISSEATNCSRISKPGMPQQRSPSLRG-PGPIKSSRSTKEL 474

Query: 167 SINSESSILN 138
           S +SE S+LN
Sbjct: 475 SFDSECSLLN 484


>ref|XP_002513117.1| conserved hypothetical protein [Ricinus communis]
           gi|223548128|gb|EEF49620.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 510

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 49/103 (47%), Positives = 67/103 (65%)
 Frame = -2

Query: 455 EDSDSLGSPVLPNYMSATESVKARLRSISLPKQRQGLVDTYSDHGSPYKDRLIFSSFSTD 276
           ED+    SP++P YM+ATES KA+ RS+S PK R G  D YSD  SP K++L   S  + 
Sbjct: 400 EDNSFSRSPIVPTYMAATESAKAKARSLSSPKLRPGSCDAYSDSYSPCKNKL---SLISS 456

Query: 275 ASTIVKSGKSPSFQQRSPSLKGLLIPRNSHPSAKDISINSESS 147
            ++ VK G+  ++QQRSPSLK L  P  S+ + KD+S +SE S
Sbjct: 457 TASEVKLGRPSAYQQRSPSLKNLPGPVKSNRTLKDLSFDSECS 499


>ref|XP_002332425.1| predicted protein [Populus trichocarpa] gi|222832378|gb|EEE70855.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/106 (45%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
 Frame = -2

Query: 455 EDSDSLGSPVLPNYMSATESVKARLRSISLPKQRQGLVDTYSDHGSPYKDRL-IFSSFST 279
           ED+    SPV+P YM+ TES KA+ RS+S PK R G  D YSD  SP K++L + SS +T
Sbjct: 349 EDNSFSRSPVVPTYMATTESAKAKTRSMSSPKLRPGSFDAYSDSYSPCKNKLSLISSTTT 408

Query: 278 DASTIVKSGKSPSFQQRSPSLKGLLIP-RNSHPSAKDISINSESSI 144
           +  +  + G+  ++QQRSPSLKGL  P + + P++K +S +S+ S+
Sbjct: 409 EVPSSARYGRPSAYQQRSPSLKGLPGPIKCNRPTSKVLSFDSDCSL 454


>ref|XP_003539928.1| PREDICTED: protein IQ-DOMAIN 14-like [Glycine max]
          Length = 460

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 54/110 (49%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
 Frame = -2

Query: 455 EDSDSLGSPVLPNYMSATESVKARLRSISLPKQRQ-GLVDTYSDHGSPYKDRL-IFSSFS 282
           ED   L SP  P YM+ATES KA+ RS S PK R  G VD  SD  SP K +L I SS +
Sbjct: 343 EDHSFLSSPATPAYMAATESAKAKARSTSSPKIRTGGNVDMNSDSYSPCKKKLSIASSIN 402

Query: 281 TDASTIVKSGK-SPSFQQRSPSLKGLLIP-RNSHPSAKDISINSESSILN 138
           ++  +  + GK S + QQRSPS KGL +P ++S  + KD+SINS+ S+ N
Sbjct: 403 SEMLSNGRVGKLSVNQQQRSPSFKGLSVPIKSSRTTIKDLSINSDCSLPN 452


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