BLASTX nr result

ID: Coptis24_contig00031045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031045
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
emb|CBI40590.3| unnamed protein product [Vitis vinifera]               64   1e-08
emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]    64   1e-08
ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
gb|AFW86094.1| hypothetical protein ZEAMMB73_140838 [Zea mays]         57   2e-06

>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = -3

Query: 331 FIEVDGIVHKFFVEDRSHPRSDEVYALLDEILCRMKLLCLESDLDSEIE 185
           FIE  G +HKF VEDRSH RSDE+YALLDE+  +MKL    +D DSEIE
Sbjct: 458 FIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKLHGNVNDSDSEIE 506


>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = -3

Query: 331 FIEVDGIVHKFFVEDRSHPRSDEVYALLDEILCRMKLLCLESDLDSEIE 185
           FIE  G +HKF VEDRSH RSDE+YALLDE+  +MKL    +D DSEIE
Sbjct: 415 FIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKLHGNVNDSDSEIE 463


>emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
          Length = 967

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = -3

Query: 331  FIEVDGIVHKFFVEDRSHPRSDEVYALLDEILCRMKLLCLESDLDSEIE 185
            FIE  G +HKF VEDRSH RSDE+YALLDE+  +MKL    +D DSEIE
Sbjct: 913  FIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKLHGNVNDSDSEIE 961


>ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|222843153|gb|EEE80700.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = -3

Query: 328 IEVDGIVHKFFVEDRSHPRSDEVYALLDEILCRMKLLCLESDLDSEIE 185
           IE +G +HKF VED+SHPR  E+YALL+EI  +MKL   E D   E+E
Sbjct: 387 IEGEGEIHKFIVEDKSHPRHYEIYALLNEISTKMKLQITEDDFKPELE 434


>gb|AFW86094.1| hypothetical protein ZEAMMB73_140838 [Zea mays]
          Length = 508

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = -3

Query: 331 FIEVDGIVHKFFVEDRSHPRSDEVYALLDEILCRMKLLCLES 206
           FIE+DG +HKF VED+SHPRS++VY  LD I   MKL+ LE+
Sbjct: 462 FIELDGRMHKFLVEDKSHPRSEKVYDALDSITLAMKLVSLEN 503


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