BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031043
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22269.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   118   4e-25
ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group] g...   118   6e-25

>emb|CBI22269.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/93 (63%), Positives = 74/93 (79%)
 Frame = +1

Query: 1   EHYGCMVNLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVGLAEVVINQLVK 180
           EHYGCMV+LLGR G LKEAF LV SMP+EPNAI+WGTLL ACR+H+  GLAE V ++LVK
Sbjct: 364 EHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVK 423

Query: 181 LEASDANAYAILSNVYAAAVNADDFTVVRLQTK 279
            E SD+   ++LSN+YAAA + D+F  +RL+ K
Sbjct: 424 SELSDSGNLSMLSNIYAAAGDWDNFANIRLRMK 456


>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/93 (63%), Positives = 74/93 (79%)
 Frame = +1

Query: 1   EHYGCMVNLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVGLAEVVINQLVK 180
           EHYGCMV+LLGR G LKEAF LV SMP+EPNAI+WGTLL ACR+H+  GLAE V ++LVK
Sbjct: 449 EHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVK 508

Query: 181 LEASDANAYAILSNVYAAAVNADDFTVVRLQTK 279
            E SD+   ++LSN+YAAA + D+F  +RL+ K
Sbjct: 509 SELSDSGNLSMLSNIYAAAGDWDNFANIRLRMK 541


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/93 (63%), Positives = 71/93 (76%)
 Frame = +1

Query: 1   EHYGCMVNLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVGLAEVVINQLVK 180
           EHYGCM++LLGR G+LKEAF L++SMPMEPNAI+ GTLL ACR+HNDV LA  V  QL K
Sbjct: 455 EHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDVDLARAVCEQLFK 514

Query: 181 LEASDANAYAILSNVYAAAVNADDFTVVRLQTK 279
           LE SD   Y++LSN+YA A +  +   VRLQ K
Sbjct: 515 LEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMK 547


>ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|222848341|gb|EEE85888.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/93 (61%), Positives = 72/93 (77%)
 Frame = +1

Query: 1   EHYGCMVNLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVGLAEVVINQLVK 180
           EHYGCMV+LLGR G LKEA+ LV+SMP+EPN ++WGTLL ACR+HN VGLAE V++ L K
Sbjct: 278 EHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMHNAVGLAEEVLDCLFK 337

Query: 181 LEASDANAYAILSNVYAAAVNADDFTVVRLQTK 279
           LE SD   Y++LSN++A+A +      VRLQ K
Sbjct: 338 LEPSDPGNYSLLSNIFASAGDWSSVANVRLQMK 370


>ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
           gi|255670427|dbj|BAH95753.1| Os12g0577900, partial
           [Oryza sativa Japonica Group]
          Length = 614

 Score =  118 bits (295), Expect = 6e-25
 Identities = 52/94 (55%), Positives = 70/94 (74%)
 Frame = +1

Query: 1   EHYGCMVNLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVGLAEVVINQLVK 180
           EHYGCM++LLGR G +KEA +L+KSMP EPN ++WG+LL ACR+H +V  AE+ +N+L K
Sbjct: 461 EHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSK 520

Query: 181 LEASDANAYAILSNVYAAAVNADDFTVVRLQTKG 282
           L+ S+A  YA+LSN+YA A    D    R+Q KG
Sbjct: 521 LQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKG 554