BLASTX nr result

ID: Coptis24_contig00031031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031031
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266113.2| PREDICTED: uncharacterized protein LOC100254...    98   7e-19
ref|XP_002316147.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_002311290.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_004139838.1| PREDICTED: uncharacterized protein LOC101215...    87   2e-15
ref|XP_002513329.1| conserved hypothetical protein [Ricinus comm...    76   3e-12

>ref|XP_002266113.2| PREDICTED: uncharacterized protein LOC100254368 [Vitis vinifera]
           gi|296082756|emb|CBI21761.3| unnamed protein product
           [Vitis vinifera]
          Length = 422

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 53/104 (50%), Positives = 67/104 (64%)
 Frame = +1

Query: 214 RGNSVHMSHDRLR*G*ECLKTQTT*GVGLLSGCS*HFMSQIDQEMICAIAELESD*QPFT 393
           RG  VH+S D      E   TQ           S HF SQID EMICAI+E+ESD QP  
Sbjct: 37  RGRKVHLSRDP---DGEPYLTQIEMKAVAAIVVSRHFDSQIDLEMICAISEIESDRQPLA 93

Query: 394 TRYTQKFKDAALGIMQILPKTAEWLVSEMGYGEYEIKGDPMMLY 525
            +Y +K KD  LGIMQ+LPKTA+WLV E+GY  YE++G+P++L+
Sbjct: 94  EQYDKKAKDTTLGIMQLLPKTADWLVRELGYRTYEVEGNPILLF 137


>ref|XP_002316147.1| predicted protein [Populus trichocarpa] gi|222865187|gb|EEF02318.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
 Frame = +1

Query: 214 RGNSVHMSHDRLR*G*ECLKTQTT*GVGLLSGCS*HFMSQIDQEMICAIAELESD*QPFT 393
           +GN VH+S D      E   TQT            HF SQI  +MICA+AEL SD QP +
Sbjct: 37  KGNKVHLSRDP---DGEPYLTQTEMKAVADIIVRRHFDSQIQPDMICAVAELASDRQPLS 93

Query: 394 TR-YTQKFKDAALGIMQILPKTAEWLVSEMGYGEYEIKGDPMMLY 525
           TR Y +K K+ ALGIMQILPKTAEWLV ++GY  YE++G+P +LY
Sbjct: 94  TRWYDKKTKETALGIMQILPKTAEWLVRDLGYQAYEVEGNPDILY 138


>ref|XP_002311290.1| predicted protein [Populus trichocarpa] gi|222851110|gb|EEE88657.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 55/104 (52%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = +1

Query: 214 RGNSVHMSHDRLR*G*ECLKTQTT*GVGLLSGCS*HFMSQIDQEMICAIAELESD*QPFT 393
           +GN VH+S D      E   TQT            HF SQ+  +MICAIAEL SD QP +
Sbjct: 37  KGNKVHLSRDP---DGEPYLTQTEMKAVADIIVRRHFDSQVHPDMICAIAELASDRQPLS 93

Query: 394 TR-YTQKFKDAALGIMQILPKTAEWLVSEMGYGEYEIKGDPMML 522
           TR Y +K K+ ALGIMQILPKTAEWLV ++GY  YE++G+P ML
Sbjct: 94  TRWYDKKTKETALGIMQILPKTAEWLVRDLGYRAYEVEGNPEML 137


>ref|XP_004139838.1| PREDICTED: uncharacterized protein LOC101215745 [Cucumis sativus]
          Length = 423

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/68 (60%), Positives = 52/68 (76%)
 Frame = +1

Query: 319 HFMSQIDQEMICAIAELESD*QPFTTRYTQKFKDAALGIMQILPKTAEWLVSEMGYGEYE 498
           HF S +D +MICA+AELESD QP  TRY +K K++ LGIMQI  KTAEWLVSE+ Y  Y 
Sbjct: 69  HFGSNVDSDMICALAELESDRQPLATRYDKKNKESTLGIMQITLKTAEWLVSELRYQSYG 128

Query: 499 IKGDPMML 522
           ++G+P +L
Sbjct: 129 LEGNPEVL 136


>ref|XP_002513329.1| conserved hypothetical protein [Ricinus communis]
           gi|223547237|gb|EEF48732.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 429

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 37/69 (53%), Positives = 49/69 (71%)
 Frame = +1

Query: 319 HFMSQIDQEMICAIAELESD*QPFTTRYTQKFKDAALGIMQILPKTAEWLVSEMGYGEYE 498
           +F SQI  +M+CAIAEL SD     T Y +K K   +GIMQILPKTAEWLV ++GY  Y+
Sbjct: 69  YFDSQILPDMLCAIAELASDRLLLATNYDKKTKQTTMGIMQILPKTAEWLVRDLGYRIYD 128

Query: 499 IKGDPMMLY 525
           ++ +P +LY
Sbjct: 129 VEENPDILY 137


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