BLASTX nr result

ID: Coptis24_contig00031024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031024
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155151.1| PREDICTED: ALBINO3-like protein 2, chloropla...   112   2e-23
ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochond...   112   2e-23
ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putat...   106   2e-21
ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloropla...   104   7e-21
ref|XP_003551682.1| PREDICTED: ALBINO3-like protein 2, chloropla...   102   4e-20

>ref|XP_004155151.1| PREDICTED: ALBINO3-like protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 366

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/73 (72%), Positives = 61/73 (83%)
 Frame = -2

Query: 219 IFPFLIAGLHFTNVQISFRMGSGGKDTGLLSILAKYYKHYLDILTVPLCLIGFCIPQGSL 40
           IFPFLIA LHF NVQ+SFR  S  K+TG++ ILAKYYK YL++LTVPL  IG+CIPQGSL
Sbjct: 59  IFPFLIASLHFINVQLSFRKSSLEKETGIIGILAKYYKLYLNLLTVPLFFIGYCIPQGSL 118

Query: 39  VYWVTNSSLTLVQ 1
           VYWVTNSS T +Q
Sbjct: 119 VYWVTNSSFTAIQ 131


>ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochondrial-like [Cucumis
           sativus]
          Length = 573

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/73 (72%), Positives = 61/73 (83%)
 Frame = -2

Query: 219 IFPFLIAGLHFTNVQISFRMGSGGKDTGLLSILAKYYKHYLDILTVPLCLIGFCIPQGSL 40
           IFPFLIA LHF NVQ+SFR  S  K+TG++ ILAKYYK YL++LTVPL  IG+CIPQGSL
Sbjct: 266 IFPFLIASLHFINVQLSFRKSSLEKETGIIGILAKYYKLYLNLLTVPLFFIGYCIPQGSL 325

Query: 39  VYWVTNSSLTLVQ 1
           VYWVTNSS T +Q
Sbjct: 326 VYWVTNSSFTAIQ 338


>ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
           gi|223548578|gb|EEF50069.1| cytochrome oxidase
           biogenesis protein, putative [Ricinus communis]
          Length = 548

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/73 (68%), Positives = 61/73 (83%)
 Frame = -2

Query: 219 IFPFLIAGLHFTNVQISFRMGSGGKDTGLLSILAKYYKHYLDILTVPLCLIGFCIPQGSL 40
           IFP LIA LH+ N+Q++F   S  K TGLLS+LAKYYK YLD+LT+PL  IG+CIPQGSL
Sbjct: 243 IFPLLIACLHYINIQLAFEKFSVQKTTGLLSLLAKYYKLYLDLLTLPLFFIGYCIPQGSL 302

Query: 39  VYWVTNSSLTLVQ 1
           VYWVTNSSL+++Q
Sbjct: 303 VYWVTNSSLSVIQ 315


>ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloroplastic [Vitis vinifera]
           gi|297735304|emb|CBI17666.3| unnamed protein product
           [Vitis vinifera]
          Length = 572

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/73 (69%), Positives = 58/73 (79%)
 Frame = -2

Query: 219 IFPFLIAGLHFTNVQISFRMGSGGKDTGLLSILAKYYKHYLDILTVPLCLIGFCIPQGSL 40
           IFP LI+GLHF NVQISF   S G+  GLL +LAKYYK YL+ILTVP+   GF IPQGSL
Sbjct: 244 IFPILISGLHFINVQISFSTSSVGQVPGLLGLLAKYYKFYLEILTVPIFFTGFYIPQGSL 303

Query: 39  VYWVTNSSLTLVQ 1
           VYWVTNSSL+ +Q
Sbjct: 304 VYWVTNSSLSAIQ 316


>ref|XP_003551682.1| PREDICTED: ALBINO3-like protein 2, chloroplastic-like [Glycine max]
          Length = 500

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/73 (63%), Positives = 56/73 (76%)
 Frame = -2

Query: 219 IFPFLIAGLHFTNVQISFRMGSGGKDTGLLSILAKYYKHYLDILTVPLCLIGFCIPQGSL 40
           IFPFLIAGLH+  VQISFR     +   +  +LAK+YK YLD LT+P+ + GFCIPQGS 
Sbjct: 175 IFPFLIAGLHYVTVQISFRKPLVAETRDIFDLLAKFYKQYLDFLTIPIAITGFCIPQGSQ 234

Query: 39  VYWVTNSSLTLVQ 1
           +YWVTNSSLTL+Q
Sbjct: 235 LYWVTNSSLTLIQ 247


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