BLASTX nr result

ID: Coptis24_contig00031003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031003
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531396.1| PREDICTED: cellulose synthase A catalytic su...   171   4e-41
ref|XP_003525098.1| PREDICTED: cellulose synthase A catalytic su...   171   6e-41
gb|AFZ78560.1| cellulose synthase [Populus tomentosa]                 170   1e-40
ref|XP_002302169.1| cellulose synthase [Populus trichocarpa] gi|...   169   2e-40
gb|AFZ78561.1| cellulose synthase [Populus tomentosa]                 169   3e-40

>ref|XP_003531396.1| PREDICTED: cellulose synthase A catalytic subunit 6
            [UDP-forming]-like [Glycine max]
          Length = 1097

 Score =  171 bits (434), Expect = 4e-41
 Identities = 77/95 (81%), Positives = 86/95 (90%)
 Frame = -2

Query: 286  DDWWRNEQFWVIGGVSSHFYALCQGLLKVLLGVNTNFTVTSKVADDGEFSDLYLIKWTWL 107
            DDWWRNEQFWVIGGVSSH +AL QGLLKVL GVNTNFTVTSK ADDGEFS+LY+ KWT L
Sbjct: 934  DDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFSELYIFKWTSL 993

Query: 106  LVPPMTLLIFNIIGLVAGIANAINTGYESWGPLFG 2
            L+PPMTLLI NI+G+V GI++AIN GY+SWGPLFG
Sbjct: 994  LIPPMTLLIMNIVGVVVGISDAINNGYDSWGPLFG 1028


>ref|XP_003525098.1| PREDICTED: cellulose synthase A catalytic subunit 6
            [UDP-forming]-like [Glycine max]
          Length = 1097

 Score =  171 bits (433), Expect = 6e-41
 Identities = 76/95 (80%), Positives = 86/95 (90%)
 Frame = -2

Query: 286  DDWWRNEQFWVIGGVSSHFYALCQGLLKVLLGVNTNFTVTSKVADDGEFSDLYLIKWTWL 107
            DDWWRNEQFWVIGGVSSH +AL QGLLKVL GVNTNFTVTSK ADDGEFS+LY+ KWT L
Sbjct: 934  DDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFSELYIFKWTSL 993

Query: 106  LVPPMTLLIFNIIGLVAGIANAINTGYESWGPLFG 2
            L+PPMTLLI NI+G+V G+++AIN GY+SWGPLFG
Sbjct: 994  LIPPMTLLIMNIVGVVVGVSDAINNGYDSWGPLFG 1028


>gb|AFZ78560.1| cellulose synthase [Populus tomentosa]
          Length = 1093

 Score =  170 bits (430), Expect = 1e-40
 Identities = 77/94 (81%), Positives = 84/94 (89%)
 Frame = -2

Query: 283  DWWRNEQFWVIGGVSSHFYALCQGLLKVLLGVNTNFTVTSKVADDGEFSDLYLIKWTWLL 104
            DWWRNEQFWVIGG SSH +AL QGLLKVL GVNTNFTVTSK ADDGEFSDLYL KWT LL
Sbjct: 933  DWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFSDLYLFKWTSLL 992

Query: 103  VPPMTLLIFNIIGLVAGIANAINTGYESWGPLFG 2
            +PPMTLLI NIIG++ GI++AIN GYE+WGPLFG
Sbjct: 993  IPPMTLLIINIIGVIVGISDAINNGYETWGPLFG 1026


>ref|XP_002302169.1| cellulose synthase [Populus trichocarpa] gi|222843895|gb|EEE81442.1|
            cellulose synthase [Populus trichocarpa]
          Length = 1093

 Score =  169 bits (428), Expect = 2e-40
 Identities = 77/94 (81%), Positives = 84/94 (89%)
 Frame = -2

Query: 283  DWWRNEQFWVIGGVSSHFYALCQGLLKVLLGVNTNFTVTSKVADDGEFSDLYLIKWTWLL 104
            DWWRNEQFWVIGG S+H +AL QGLLKVL GVNTNFTVTSK ADDGEFSDLYL KWT LL
Sbjct: 933  DWWRNEQFWVIGGASAHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFSDLYLFKWTSLL 992

Query: 103  VPPMTLLIFNIIGLVAGIANAINTGYESWGPLFG 2
            +PPMTLLI NIIG+V GI++AIN GYE+WGPLFG
Sbjct: 993  IPPMTLLIINIIGVVVGISDAINNGYETWGPLFG 1026


>gb|AFZ78561.1| cellulose synthase [Populus tomentosa]
          Length = 1097

 Score =  169 bits (427), Expect = 3e-40
 Identities = 77/94 (81%), Positives = 84/94 (89%)
 Frame = -2

Query: 283  DWWRNEQFWVIGGVSSHFYALCQGLLKVLLGVNTNFTVTSKVADDGEFSDLYLIKWTWLL 104
            DWWRNEQFWVIGG SSH +AL QGLLKVL GVNTNFTVTSK ADDGEFS+LYL KWT LL
Sbjct: 937  DWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFSELYLFKWTSLL 996

Query: 103  VPPMTLLIFNIIGLVAGIANAINTGYESWGPLFG 2
            +PPMTLLI NIIG+V GI++AIN GYE+WGPLFG
Sbjct: 997  IPPMTLLIINIIGVVVGISDAINNGYETWGPLFG 1030


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