BLASTX nr result
ID: Coptis24_contig00030963
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030963 (383 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002302361.1| predicted protein [Populus trichocarpa] gi|2... 158 4e-37 ref|XP_002273556.2| PREDICTED: MADS-box transcription factor 27-... 154 9e-36 emb|CBI25705.3| unnamed protein product [Vitis vinifera] 154 9e-36 emb|CBI35415.3| unnamed protein product [Vitis vinifera] 153 2e-35 ref|XP_002313958.1| predicted protein [Populus trichocarpa] gi|2... 153 2e-35 >ref|XP_002302361.1| predicted protein [Populus trichocarpa] gi|222844087|gb|EEE81634.1| predicted protein [Populus trichocarpa] Length = 228 Score = 158 bits (400), Expect = 4e-37 Identities = 78/87 (89%), Positives = 86/87 (98%) Frame = -3 Query: 261 MGRGKIVIRRIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLVIFSSTGKLYDFAST 82 MGRGKIVIRRIDN+TSRQVTFSKRRNGLLKKAKELAILCDAEVG++IFSSTGKLYDF+ST Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVMIFSSTGKLYDFSST 60 Query: 81 SMKSVIDQYNKSKEEHHQLLNPTSEVK 1 SMKSVI++YNKSK+EHHQ+ NPTSEVK Sbjct: 61 SMKSVIERYNKSKDEHHQMGNPTSEVK 87 >ref|XP_002273556.2| PREDICTED: MADS-box transcription factor 27-like [Vitis vinifera] gi|297736691|emb|CBI25708.3| unnamed protein product [Vitis vinifera] Length = 224 Score = 154 bits (388), Expect = 9e-36 Identities = 77/87 (88%), Positives = 83/87 (95%) Frame = -3 Query: 261 MGRGKIVIRRIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLVIFSSTGKLYDFAST 82 MGRGKI IRRIDN+TSRQVTFSKRR GLLKKAKELAILCDAEVGL+IFSSTGKLY+FAST Sbjct: 1 MGRGKIEIRRIDNSTSRQVTFSKRRKGLLKKAKELAILCDAEVGLIIFSSTGKLYEFAST 60 Query: 81 SMKSVIDQYNKSKEEHHQLLNPTSEVK 1 SMKS ID+Y+KSKEE+HQLLNP SEVK Sbjct: 61 SMKSAIDRYHKSKEENHQLLNPASEVK 87 >emb|CBI25705.3| unnamed protein product [Vitis vinifera] Length = 224 Score = 154 bits (388), Expect = 9e-36 Identities = 77/87 (88%), Positives = 83/87 (95%) Frame = -3 Query: 261 MGRGKIVIRRIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLVIFSSTGKLYDFAST 82 MGRGKI IRRIDNTTSRQVTFSKRR GLLKKAKELAILCDAEVGL+IFSSTGKLY+FAST Sbjct: 1 MGRGKIEIRRIDNTTSRQVTFSKRRKGLLKKAKELAILCDAEVGLIIFSSTGKLYEFAST 60 Query: 81 SMKSVIDQYNKSKEEHHQLLNPTSEVK 1 S+KS ID+Y+KSKEE+HQLLNP SEVK Sbjct: 61 SIKSAIDRYHKSKEENHQLLNPASEVK 87 >emb|CBI35415.3| unnamed protein product [Vitis vinifera] Length = 237 Score = 153 bits (386), Expect = 2e-35 Identities = 76/87 (87%), Positives = 83/87 (95%) Frame = -3 Query: 261 MGRGKIVIRRIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLVIFSSTGKLYDFAST 82 MGRGKIVIRRIDN+TSRQVTFSKRRNGLLKKAKEL+ILCDAEVGLVIFSSTGKLYD+A+T Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVIFSSTGKLYDYANT 60 Query: 81 SMKSVIDQYNKSKEEHHQLLNPTSEVK 1 S+ SVID+YNK KEE HQ+LNP SEVK Sbjct: 61 SVNSVIDRYNKLKEEQHQVLNPASEVK 87 >ref|XP_002313958.1| predicted protein [Populus trichocarpa] gi|222850366|gb|EEE87913.1| predicted protein [Populus trichocarpa] Length = 229 Score = 153 bits (386), Expect = 2e-35 Identities = 74/87 (85%), Positives = 83/87 (95%) Frame = -3 Query: 261 MGRGKIVIRRIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLVIFSSTGKLYDFAST 82 MGRGKIVIRRIDN+TSRQVTFSKRRNGLLKKAKEL+ILCDAE+G++IFSSTGKLYD+A+T Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEIGVIIFSSTGKLYDYANT 60 Query: 81 SMKSVIDQYNKSKEEHHQLLNPTSEVK 1 SMKS+ID+YNK KEE QLLNP SEVK Sbjct: 61 SMKSIIDRYNKQKEEQQQLLNPASEVK 87