BLASTX nr result

ID: Coptis24_contig00030963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030963
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302361.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37
ref|XP_002273556.2| PREDICTED: MADS-box transcription factor 27-...   154   9e-36
emb|CBI25705.3| unnamed protein product [Vitis vinifera]              154   9e-36
emb|CBI35415.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002313958.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35

>ref|XP_002302361.1| predicted protein [Populus trichocarpa] gi|222844087|gb|EEE81634.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/87 (89%), Positives = 86/87 (98%)
 Frame = -3

Query: 261 MGRGKIVIRRIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLVIFSSTGKLYDFAST 82
           MGRGKIVIRRIDN+TSRQVTFSKRRNGLLKKAKELAILCDAEVG++IFSSTGKLYDF+ST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVMIFSSTGKLYDFSST 60

Query: 81  SMKSVIDQYNKSKEEHHQLLNPTSEVK 1
           SMKSVI++YNKSK+EHHQ+ NPTSEVK
Sbjct: 61  SMKSVIERYNKSKDEHHQMGNPTSEVK 87


>ref|XP_002273556.2| PREDICTED: MADS-box transcription factor 27-like [Vitis vinifera]
           gi|297736691|emb|CBI25708.3| unnamed protein product
           [Vitis vinifera]
          Length = 224

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/87 (88%), Positives = 83/87 (95%)
 Frame = -3

Query: 261 MGRGKIVIRRIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLVIFSSTGKLYDFAST 82
           MGRGKI IRRIDN+TSRQVTFSKRR GLLKKAKELAILCDAEVGL+IFSSTGKLY+FAST
Sbjct: 1   MGRGKIEIRRIDNSTSRQVTFSKRRKGLLKKAKELAILCDAEVGLIIFSSTGKLYEFAST 60

Query: 81  SMKSVIDQYNKSKEEHHQLLNPTSEVK 1
           SMKS ID+Y+KSKEE+HQLLNP SEVK
Sbjct: 61  SMKSAIDRYHKSKEENHQLLNPASEVK 87


>emb|CBI25705.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/87 (88%), Positives = 83/87 (95%)
 Frame = -3

Query: 261 MGRGKIVIRRIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLVIFSSTGKLYDFAST 82
           MGRGKI IRRIDNTTSRQVTFSKRR GLLKKAKELAILCDAEVGL+IFSSTGKLY+FAST
Sbjct: 1   MGRGKIEIRRIDNTTSRQVTFSKRRKGLLKKAKELAILCDAEVGLIIFSSTGKLYEFAST 60

Query: 81  SMKSVIDQYNKSKEEHHQLLNPTSEVK 1
           S+KS ID+Y+KSKEE+HQLLNP SEVK
Sbjct: 61  SIKSAIDRYHKSKEENHQLLNPASEVK 87


>emb|CBI35415.3| unnamed protein product [Vitis vinifera]
          Length = 237

 Score =  153 bits (386), Expect = 2e-35
 Identities = 76/87 (87%), Positives = 83/87 (95%)
 Frame = -3

Query: 261 MGRGKIVIRRIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLVIFSSTGKLYDFAST 82
           MGRGKIVIRRIDN+TSRQVTFSKRRNGLLKKAKEL+ILCDAEVGLVIFSSTGKLYD+A+T
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVIFSSTGKLYDYANT 60

Query: 81  SMKSVIDQYNKSKEEHHQLLNPTSEVK 1
           S+ SVID+YNK KEE HQ+LNP SEVK
Sbjct: 61  SVNSVIDRYNKLKEEQHQVLNPASEVK 87


>ref|XP_002313958.1| predicted protein [Populus trichocarpa] gi|222850366|gb|EEE87913.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/87 (85%), Positives = 83/87 (95%)
 Frame = -3

Query: 261 MGRGKIVIRRIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLVIFSSTGKLYDFAST 82
           MGRGKIVIRRIDN+TSRQVTFSKRRNGLLKKAKEL+ILCDAE+G++IFSSTGKLYD+A+T
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEIGVIIFSSTGKLYDYANT 60

Query: 81  SMKSVIDQYNKSKEEHHQLLNPTSEVK 1
           SMKS+ID+YNK KEE  QLLNP SEVK
Sbjct: 61  SMKSIIDRYNKQKEEQQQLLNPASEVK 87


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