BLASTX nr result
ID: Coptis24_contig00030953
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030953 (413 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310882.1| AP2 domain-containing transcription factor [... 75 5e-12 ref|XP_002285467.2| PREDICTED: AP2-like ethylene-responsive tran... 56 3e-06 ref|XP_003527742.1| PREDICTED: AP2-like ethylene-responsive tran... 56 3e-06 ref|XP_002302387.1| AP2 domain-containing transcription factor [... 55 4e-06 ref|XP_004143528.1| PREDICTED: AP2-like ethylene-responsive tran... 55 8e-06 >ref|XP_002310882.1| AP2 domain-containing transcription factor [Populus trichocarpa] gi|222853785|gb|EEE91332.1| AP2 domain-containing transcription factor [Populus trichocarpa] Length = 543 Score = 75.1 bits (183), Expect = 5e-12 Identities = 43/91 (47%), Positives = 47/91 (51%), Gaps = 3/91 (3%) Frame = +1 Query: 148 MKSMGXXXXXXXXXXXWLGFSLSPQMNMEVPS--DXXXXXXXXXXXXXXXXXXXFFHSS- 318 MKSM WLGFSLSPQMNMEVPS D FHS Sbjct: 1 MKSMNNDDGNNNHNADWLGFSLSPQMNMEVPSGTDHHQQTRSASAAVPTAIPTNLFHSQL 60 Query: 319 SHMNSGICYGVEGESAGFYSHLSAMPINSDG 411 H+N G+ YGVEGE+ GFYS L MP+ SDG Sbjct: 61 PHLNCGLYYGVEGENGGFYSPLHVMPLKSDG 91 >ref|XP_002285467.2| PREDICTED: AP2-like ethylene-responsive transcription factor ANT-like [Vitis vinifera] Length = 674 Score = 56.2 bits (134), Expect = 3e-06 Identities = 32/73 (43%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = +1 Query: 196 WLGFSLSPQMNMEVPSDXXXXXXXXXXXXXXXXXXXF-FHSSSHMNSGICYGVEGESAGF 372 WLGFSLSP M MEV SD F S H+NS Y GE+ F Sbjct: 15 WLGFSLSPHMKMEVASDPQYHHQTQPAAAAVSSAVPTSFFLSPHLNSSAIYYGVGENGAF 74 Query: 373 YSHLSAMPINSDG 411 +SHLS MP+ SDG Sbjct: 75 HSHLSVMPLKSDG 87 >ref|XP_003527742.1| PREDICTED: AP2-like ethylene-responsive transcription factor ANT-like [Glycine max] Length = 635 Score = 56.2 bits (134), Expect = 3e-06 Identities = 34/73 (46%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Frame = +1 Query: 196 WLGFSLSPQMNMEVPSDXXXXXXXXXXXXXXXXXXXFFHSSSHM-NSGICYGVEGESAGF 372 WLGFSLSP M MEV S F+ S SHM NSG+CY V GE+ F Sbjct: 18 WLGFSLSPHMKMEVTS--------AATVSDNNVPTTFYMSPSHMSNSGMCYSV-GENGNF 68 Query: 373 YSHLSAMPINSDG 411 +S L+ MP+ SDG Sbjct: 69 HSPLTVMPLKSDG 81 >ref|XP_002302387.1| AP2 domain-containing transcription factor [Populus trichocarpa] gi|222844113|gb|EEE81660.1| AP2 domain-containing transcription factor [Populus trichocarpa] Length = 637 Score = 55.5 bits (132), Expect = 4e-06 Identities = 36/80 (45%), Positives = 42/80 (52%), Gaps = 8/80 (10%) Frame = +1 Query: 196 WLGFSLSPQMNMEVPSD-------XXXXXXXXXXXXXXXXXXXFFHSSSHMNS-GICYGV 351 WLGFSLSP M MEV SD F+ S++H NS GI YGV Sbjct: 15 WLGFSLSPHMKMEVASDPQHHHQYHHQNHAPTAVSVSAAVPTSFYLSTTHYNSPGISYGV 74 Query: 352 EGESAGFYSHLSAMPINSDG 411 GE+ GF+S LS MP+ SDG Sbjct: 75 -GENDGFHSPLSVMPLKSDG 93 >ref|XP_004143528.1| PREDICTED: AP2-like ethylene-responsive transcription factor ANT-like [Cucumis sativus] gi|449532844|ref|XP_004173388.1| PREDICTED: AP2-like ethylene-responsive transcription factor ANT-like [Cucumis sativus] Length = 608 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/35 (68%), Positives = 26/35 (74%) Frame = +1 Query: 307 FHSSSHMNSGICYGVEGESAGFYSHLSAMPINSDG 411 FHS S N GICYGV+GE FYS LSAMP+ SDG Sbjct: 20 FHSPSQFNYGICYGVDGEHGAFYSPLSAMPLKSDG 54