BLASTX nr result
ID: Coptis24_contig00030946
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00030946
(799 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI39142.3| unnamed protein product [Vitis vinifera] 215 1e-53
ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 215 1e-53
emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera] 214 2e-53
ref|XP_002322776.1| predicted protein [Populus trichocarpa] gi|2... 203 4e-50
gb|ABK95582.1| unknown [Populus trichocarpa] 203 4e-50
>emb|CBI39142.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 215 bits (547), Expect = 1e-53
Identities = 108/153 (70%), Positives = 123/153 (80%)
Frame = +1
Query: 1 KDTIRMFNGALVGGRSVKVNFPEVPRGGEREVMGPKIRSSYRGFVESPYKIYAGNLSWRL 180
K+ IRMF+G+ VGGR+VKVNFPEVPRGGER VMGPKIRSSYRGFV+SPYKIYAGNLSWRL
Sbjct: 45 KEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRL 104
Query: 181 TSEGLRDAFDGQPGLLSARVIYERDSGRSRGFGFITFATMRDAQSALDAMNAVEVEGRPL 360
TSEGLRDAF PGLL A+VIYER+SGRSRGFGF++FA+ +A+SAL+AMN VEVEGRPL
Sbjct: 105 TSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMNEVEVEGRPL 164
Query: 361 RLNLAGENADPRSQETKAEAETDDNATAMQSDS 459
RLNLA A P DN+ + S S
Sbjct: 165 RLNLAAVRAPPAPSPGPGLERNVDNSELISSIS 197
>ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 311
Score = 215 bits (547), Expect = 1e-53
Identities = 108/153 (70%), Positives = 123/153 (80%)
Frame = +1
Query: 1 KDTIRMFNGALVGGRSVKVNFPEVPRGGEREVMGPKIRSSYRGFVESPYKIYAGNLSWRL 180
K+ IRMF+G+ VGGR+VKVNFPEVPRGGER VMGPKIRSSYRGFV+SPYKIYAGNLSWRL
Sbjct: 158 KEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRL 217
Query: 181 TSEGLRDAFDGQPGLLSARVIYERDSGRSRGFGFITFATMRDAQSALDAMNAVEVEGRPL 360
TSEGLRDAF PGLL A+VIYER+SGRSRGFGF++FA+ +A+SAL+AMN VEVEGRPL
Sbjct: 218 TSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMNEVEVEGRPL 277
Query: 361 RLNLAGENADPRSQETKAEAETDDNATAMQSDS 459
RLNLA A P DN+ + S S
Sbjct: 278 RLNLAAVRAPPAPSPGPGLERNVDNSELISSIS 310
Score = 60.8 bits (146), Expect = 3e-07
Identities = 25/74 (33%), Positives = 48/74 (64%)
Frame = +1
Query: 148 KIYAGNLSWRLTSEGLRDAFDGQPGLLSARVIYERDSGRSRGFGFITFATMRDAQSALDA 327
++Y GNL + +TS L D F+ ++S ++Y+R + RSRGF F+T ++++A+ A+
Sbjct: 104 RLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRM 163
Query: 328 MNAVEVEGRPLRLN 369
+ +V GR +++N
Sbjct: 164 FDGSQVGGRTVKVN 177
>emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
Length = 454
Score = 214 bits (544), Expect = 2e-53
Identities = 107/153 (69%), Positives = 123/153 (80%)
Frame = +1
Query: 1 KDTIRMFNGALVGGRSVKVNFPEVPRGGEREVMGPKIRSSYRGFVESPYKIYAGNLSWRL 180
K+ IRMF+G+ VGGR+VKVNFPEVPRGGER VMGPKIRSSYRGFV+SPYKIYAGNLSWRL
Sbjct: 301 KEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRL 360
Query: 181 TSEGLRDAFDGQPGLLSARVIYERDSGRSRGFGFITFATMRDAQSALDAMNAVEVEGRPL 360
TSEGLRDAF PGLL A+VIYER+SGRSRGFGF++FA+ +A+SAL+AM+ VEVEGRPL
Sbjct: 361 TSEGLRDAFADXPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMBEVEVEGRPL 420
Query: 361 RLNLAGENADPRSQETKAEAETDDNATAMQSDS 459
RLNLA A P DN+ + S S
Sbjct: 421 RLNLAAVRAPPAPSPGPGLERNVDNSELISSIS 453
Score = 58.2 bits (139), Expect = 2e-06
Identities = 24/74 (32%), Positives = 47/74 (63%)
Frame = +1
Query: 148 KIYAGNLSWRLTSEGLRDAFDGQPGLLSARVIYERDSGRSRGFGFITFATMRDAQSALDA 327
++Y GNL + +TS L F+ ++S ++Y+R + RSRGF F+T ++++A+ A+
Sbjct: 247 RLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRM 306
Query: 328 MNAVEVEGRPLRLN 369
+ +V GR +++N
Sbjct: 307 FDGSQVGGRTVKVN 320
>ref|XP_002322776.1| predicted protein [Populus trichocarpa] gi|222867406|gb|EEF04537.1|
predicted protein [Populus trichocarpa]
Length = 324
Score = 203 bits (516), Expect = 4e-50
Identities = 99/155 (63%), Positives = 126/155 (81%)
Frame = +1
Query: 1 KDTIRMFNGALVGGRSVKVNFPEVPRGGEREVMGPKIRSSYRGFVESPYKIYAGNLSWRL 180
K+ IRMFNG+ VGGR+++VNFPEVPRGGEREVM P+IRS Y+GF++S +KIYAGNL WRL
Sbjct: 171 KEAIRMFNGSQVGGRTLRVNFPEVPRGGEREVMEPRIRSGYKGFIDSEHKIYAGNLGWRL 230
Query: 181 TSEGLRDAFDGQPGLLSARVIYERDSGRSRGFGFITFATMRDAQSALDAMNAVEVEGRPL 360
TSEGL DAF QPGLLSA+VIYERD+GRSRGFGF++F + +A++AL+AMN EV+GRPL
Sbjct: 231 TSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGEEVDGRPL 290
Query: 361 RLNLAGENADPRSQETKAEAETDDNATAMQSDSAV 465
RLNLAGE + P + E T+DN + + S++
Sbjct: 291 RLNLAGERSYPPPAK---ENNTEDNLESSELLSSI 322
Score = 62.8 bits (151), Expect = 9e-08
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +1
Query: 148 KIYAGNLSWRLTSEGLRDAFDGQPGLLSARVIYERDSGRSRGFGFITFATMRDAQSALDA 327
K+Y GNL + +TS L + F+ + A VI +R + RSRGFGF+T ++ +A+ A+
Sbjct: 117 KLYVGNLPYSMTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEEAKEAIRM 176
Query: 328 MNAVEVEGRPLRLN 369
N +V GR LR+N
Sbjct: 177 FNGSQVGGRTLRVN 190
>gb|ABK95582.1| unknown [Populus trichocarpa]
Length = 198
Score = 203 bits (516), Expect = 4e-50
Identities = 99/155 (63%), Positives = 126/155 (81%)
Frame = +1
Query: 1 KDTIRMFNGALVGGRSVKVNFPEVPRGGEREVMGPKIRSSYRGFVESPYKIYAGNLSWRL 180
K+ IRMFNG+ VGGR+++VNFPEVPRGGEREVM P+IRS Y+GF++S +KIYAGNL WRL
Sbjct: 45 KEAIRMFNGSQVGGRTLRVNFPEVPRGGEREVMEPRIRSGYKGFIDSEHKIYAGNLGWRL 104
Query: 181 TSEGLRDAFDGQPGLLSARVIYERDSGRSRGFGFITFATMRDAQSALDAMNAVEVEGRPL 360
TSEGL DAF QPGLLSA+VIYERD+GRSRGFGF++F + +A++AL+AMN EV+GRPL
Sbjct: 105 TSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGEEVDGRPL 164
Query: 361 RLNLAGENADPRSQETKAEAETDDNATAMQSDSAV 465
RLNLAGE + P + E T+DN + + S++
Sbjct: 165 RLNLAGERSYPPPAK---ENNTEDNLESSELLSSI 196