BLASTX nr result
ID: Coptis24_contig00030895
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030895 (386 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI30038.3| unnamed protein product [Vitis vinifera] 81 5e-17 emb|CAN63788.1| hypothetical protein VITISV_000288 [Vitis vinifera] 81 5e-17 ref|XP_002532341.1| Receptor protein kinase CLAVATA1 precursor, ... 84 1e-16 ref|XP_002275203.2| PREDICTED: LOW QUALITY PROTEIN: protein STRU... 81 3e-16 ref|XP_004159012.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL... 74 4e-16 >emb|CBI30038.3| unnamed protein product [Vitis vinifera] Length = 737 Score = 80.9 bits (198), Expect(2) = 5e-17 Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 2/65 (3%) Frame = +3 Query: 27 YTAQENSQPGVDQLKRDLYAFRVL--ELLTGRQPIDSSRPRQEQSMVKWASTRLHDYKCL 200 Y A E+ QPG+D K D+YAF VL ELLTGR+P DSSR R+EQS+VKWAS RLHD L Sbjct: 589 YIAPEHGQPGIDNKKSDVYAFGVLLLELLTGRRPFDSSRSREEQSLVKWASARLHDNDSL 648 Query: 201 EAIVD 215 +VD Sbjct: 649 GQMVD 653 Score = 31.6 bits (70), Expect(2) = 5e-17 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = +2 Query: 236 LLQLCIQTEPEFRLTISEIVDS----LELLNNRS*EDG-FGRESFDLSLQTINT 382 ++ LCIQ E EFR ++E+V+S L+ +R E G E FD S + NT Sbjct: 671 IVSLCIQPEKEFRPPMTEVVESVRRLLQKTRSRLIEGGEVEVEGFDKSFHSTNT 724 >emb|CAN63788.1| hypothetical protein VITISV_000288 [Vitis vinifera] Length = 658 Score = 80.9 bits (198), Expect(2) = 5e-17 Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 2/65 (3%) Frame = +3 Query: 27 YTAQENSQPGVDQLKRDLYAFRVL--ELLTGRQPIDSSRPRQEQSMVKWASTRLHDYKCL 200 Y A E+ QPG+D K D+YAF VL ELLTGR+P DSSR R+EQS+VKWAS RLHD L Sbjct: 510 YIAPEHGQPGIDNKKSDVYAFGVLLLELLTGRRPFDSSRSREEQSLVKWASARLHDNDSL 569 Query: 201 EAIVD 215 +VD Sbjct: 570 GQMVD 574 Score = 31.6 bits (70), Expect(2) = 5e-17 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = +2 Query: 236 LLQLCIQTEPEFRLTISEIVDS----LELLNNRS*EDG-FGRESFDLSLQTINT 382 ++ LCIQ E EFR ++E+V+S L+ +R E G E FD S + NT Sbjct: 592 IVSLCIQPEKEFRPPMTEVVESVRRLLQKTRSRLIEGGEVEVEGFDKSFHSTNT 645 >ref|XP_002532341.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis] gi|223527958|gb|EEF30043.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis] Length = 718 Score = 84.0 bits (206), Expect(2) = 1e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = +3 Query: 12 VSCTDYTAQENSQPGVDQLKRDLYAFRVL--ELLTGRQPIDSSRPRQEQSMVKWASTRLH 185 V T YTA E+ +PG D K D+YAF VL ELLTGR+P DSS+ R+EQS+ KWAS+RLH Sbjct: 564 VGDTGYTAPEHGEPGTDNTKSDVYAFGVLLLELLTGRKPFDSSKSRKEQSLAKWASSRLH 623 Query: 186 DYKCLEAIVDPTTR 227 D L +VDP+ + Sbjct: 624 DNAYLAQMVDPSIK 637 Score = 26.9 bits (58), Expect(2) = 1e-16 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = +2 Query: 236 LLQLCIQTEPEFRLTISEIVDSL-ELLNN 319 ++ CIQ E FR +SEIV+SL LL N Sbjct: 651 IVSFCIQPEKLFRPPMSEIVESLASLLQN 679 >ref|XP_002275203.2| PREDICTED: LOW QUALITY PROTEIN: protein STRUBBELIG-RECEPTOR FAMILY 2 [Vitis vinifera] Length = 721 Score = 80.9 bits (198), Expect(2) = 3e-16 Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 2/65 (3%) Frame = +3 Query: 27 YTAQENSQPGVDQLKRDLYAFRVL--ELLTGRQPIDSSRPRQEQSMVKWASTRLHDYKCL 200 Y A E+ QPG+D K D+YAF VL ELLTGR+P DSSR R+EQS+VKWAS RLHD L Sbjct: 565 YIAPEHGQPGIDNKKSDVYAFGVLLLELLTGRRPFDSSRSREEQSLVKWASARLHDNDSL 624 Query: 201 EAIVD 215 +VD Sbjct: 625 GQMVD 629 Score = 28.9 bits (63), Expect(2) = 3e-16 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +2 Query: 236 LLQLCIQTEPEFRLTISEIVDSLELL 313 ++ LCIQ E EFR ++E+V+S+ L Sbjct: 647 IVSLCIQPEKEFRPPMTEVVESVRRL 672 >ref|XP_004159012.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 7-like [Cucumis sativus] Length = 715 Score = 74.3 bits (181), Expect(2) = 4e-16 Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 2/66 (3%) Frame = +3 Query: 27 YTAQENSQPGVDQLKRDLYAFRV--LELLTGRQPIDSSRPRQEQSMVKWASTRLHDYKCL 200 YTA E + G LK D+Y+F V LELLTGR+P DSSRPR EQS+V+WA+ +LHD L Sbjct: 579 YTAPEVTMSGQYTLKSDVYSFGVVMLELLTGRKPFDSSRPRSEQSLVRWATPQLHDIDAL 638 Query: 201 EAIVDP 218 +VDP Sbjct: 639 TKMVDP 644 Score = 35.0 bits (79), Expect(2) = 4e-16 Identities = 15/30 (50%), Positives = 23/30 (76%) Frame = +2 Query: 236 LLQLCIQTEPEFRLTISEIVDSLELLNNRS 325 ++ LC+QTEPEFR +SE+V++L L R+ Sbjct: 661 VIALCVQTEPEFRPPMSEVVEALVRLVQRA 690