BLASTX nr result

ID: Coptis24_contig00030800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030800
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vi...   122   2e-26
emb|CBI32272.3| unnamed protein product [Vitis vinifera]              122   2e-26
emb|CBI35669.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002268849.1| PREDICTED: auxin response factor 2-like [Vit...   122   4e-26
ref|XP_003630586.1| Auxin response factor-like protein [Medicago...   119   3e-25

>ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
          Length = 801

 Score =  122 bits (307), Expect = 2e-26
 Identities = 53/94 (56%), Positives = 70/94 (74%)
 Frame = +2

Query: 8   CAITTLSCIKVHKYGIAIGRTVDVMKFNGYDELATELDHMFDFKGALMKQNSDWCVVYTD 187
           C++   SC KV KYG A+GR++D+ +F+GYDEL  ELD MFDF G+LM  +  W V YTD
Sbjct: 702 CSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLMDGSCRWHVTYTD 761

Query: 188 EEGDTMLVGDSPWMEFRSMVRKLLVCPKEHIDTL 289
           +EGD ML+GD PW EFRSMV+++ +CPKE  + L
Sbjct: 762 DEGDMMLLGDYPWQEFRSMVQRIFICPKEETERL 795


>emb|CBI32272.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  122 bits (307), Expect = 2e-26
 Identities = 53/94 (56%), Positives = 70/94 (74%)
 Frame = +2

Query: 8   CAITTLSCIKVHKYGIAIGRTVDVMKFNGYDELATELDHMFDFKGALMKQNSDWCVVYTD 187
           C++   SC KV KYG A+GR++D+ +F+GYDEL  ELD MFDF G+LM  +  W V YTD
Sbjct: 597 CSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLMDGSCRWHVTYTD 656

Query: 188 EEGDTMLVGDSPWMEFRSMVRKLLVCPKEHIDTL 289
           +EGD ML+GD PW EFRSMV+++ +CPKE  + L
Sbjct: 657 DEGDMMLLGDYPWQEFRSMVQRIFICPKEETERL 690


>emb|CBI35669.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/91 (60%), Positives = 69/91 (75%)
 Frame = +2

Query: 17  TTLSCIKVHKYGIAIGRTVDVMKFNGYDELATELDHMFDFKGALMKQNSDWCVVYTDEEG 196
           +T SCIKVHK GIA+GR+VD+ KFNGY EL +ELD +F+F G L+  N DW +V+TD+EG
Sbjct: 636 STRSCIKVHKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLIVFTDDEG 695

Query: 197 DTMLVGDSPWMEFRSMVRKLLVCPKEHIDTL 289
           D MLVGD PW EF SMVRK+ V  +E I  +
Sbjct: 696 DMMLVGDDPWPEFCSMVRKIFVYTREEIQRM 726


>ref|XP_002268849.1| PREDICTED: auxin response factor 2-like [Vitis vinifera]
          Length = 769

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/91 (60%), Positives = 69/91 (75%)
 Frame = +2

Query: 17  TTLSCIKVHKYGIAIGRTVDVMKFNGYDELATELDHMFDFKGALMKQNSDWCVVYTDEEG 196
           +T SCIKVHK GIA+GR+VD+ KFNGY EL +ELD +F+F G L+  N DW +V+TD+EG
Sbjct: 636 STRSCIKVHKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLIVFTDDEG 695

Query: 197 DTMLVGDSPWMEFRSMVRKLLVCPKEHIDTL 289
           D MLVGD PW EF SMVRK+ V  +E I  +
Sbjct: 696 DMMLVGDDPWPEFCSMVRKIFVYTREEIQRM 726


>ref|XP_003630586.1| Auxin response factor-like protein [Medicago truncatula]
           gi|355524608|gb|AET05062.1| Auxin response factor-like
           protein [Medicago truncatula]
          Length = 733

 Score =  119 bits (297), Expect = 3e-25
 Identities = 53/88 (60%), Positives = 65/88 (73%)
 Frame = +2

Query: 26  SCIKVHKYGIAIGRTVDVMKFNGYDELATELDHMFDFKGALMKQNSDWCVVYTDEEGDTM 205
           SC KVHK GIA+GR+VD+ KF+ YDEL  ELD +F+F+G L+    DW VV+TD EGD M
Sbjct: 611 SCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDNEGDMM 670

Query: 206 LVGDSPWMEFRSMVRKLLVCPKEHIDTL 289
           LVGD PW EF SMVRK+ + PKE I  +
Sbjct: 671 LVGDDPWQEFCSMVRKIYIYPKEEIQKM 698


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