BLASTX nr result

ID: Coptis24_contig00030787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030787
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520949.1| conserved hypothetical protein [Ricinus comm...   171   4e-41
ref|XP_002302087.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_002274761.2| PREDICTED: uncharacterized protein LOC100264...   169   2e-40
ref|XP_004146964.1| PREDICTED: uncharacterized protein LOC101220...   159   2e-37
ref|XP_002892146.1| hypothetical protein ARALYDRAFT_311407 [Arab...   158   5e-37

>ref|XP_002520949.1| conserved hypothetical protein [Ricinus communis]
           gi|223539786|gb|EEF41366.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 3591

 Score =  171 bits (434), Expect = 4e-41
 Identities = 91/133 (68%), Positives = 99/133 (74%)
 Frame = -3

Query: 401 SSHLDNYKLCQQLRTVPLFILNMAGFPPSLQDIILKILEYAVTVVNCVPXXXXXXXXXXX 222
           SSHL+NYKLCQQLRTVPLFILNMAGFPPSLQ+IILKILEYAVTVVNC+P           
Sbjct: 524 SSHLENYKLCQQLRTVPLFILNMAGFPPSLQEIILKILEYAVTVVNCIPEQELLSLCCLL 583

Query: 221 XQPITSELKHTIVSFFVKLLSFDQQYKKXXXXXXXXXXXXXXLKQHKFLSGSEQYNKSTG 42
            QPITSELKHTI+SFFVKLLSFDQQYKK              LKQHKFL G +Q + +T 
Sbjct: 584 QQPITSELKHTILSFFVKLLSFDQQYKKVLREVGVLEVLIDDLKQHKFLLGPDQQSVNTN 643

Query: 41  ELERKSSSSSFKK 3
             ERK+ SSSFKK
Sbjct: 644 HSERKAGSSSFKK 656


>ref|XP_002302087.1| predicted protein [Populus trichocarpa] gi|222843813|gb|EEE81360.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  170 bits (430), Expect = 1e-40
 Identities = 92/133 (69%), Positives = 97/133 (72%)
 Frame = -3

Query: 401 SSHLDNYKLCQQLRTVPLFILNMAGFPPSLQDIILKILEYAVTVVNCVPXXXXXXXXXXX 222
           SSHL+NYKLCQQLRTVPL ILNMAGFPPSLQDIILKILEYAVTVVNCVP           
Sbjct: 115 SSHLENYKLCQQLRTVPLLILNMAGFPPSLQDIILKILEYAVTVVNCVPEQELLSLCCLL 174

Query: 221 XQPITSELKHTIVSFFVKLLSFDQQYKKXXXXXXXXXXXXXXLKQHKFLSGSEQYNKSTG 42
            QPI SELKHTI+SFF+KLLSFDQQYKK              LKQHKF+ G EQ   S  
Sbjct: 175 QQPIASELKHTILSFFLKLLSFDQQYKKVLREVGLLEVLLDDLKQHKFILGLEQQTVSPS 234

Query: 41  ELERKSSSSSFKK 3
           + ERKSSSSSFKK
Sbjct: 235 QSERKSSSSSFKK 247


>ref|XP_002274761.2| PREDICTED: uncharacterized protein LOC100264735 [Vitis vinifera]
          Length = 3544

 Score =  169 bits (428), Expect = 2e-40
 Identities = 89/133 (66%), Positives = 98/133 (73%)
 Frame = -3

Query: 401 SSHLDNYKLCQQLRTVPLFILNMAGFPPSLQDIILKILEYAVTVVNCVPXXXXXXXXXXX 222
           S HL+NYKLCQQLRTVPL ILNM GFPPSLQ+IILKILEYAVTVVNC+P           
Sbjct: 526 SGHLENYKLCQQLRTVPLLILNMDGFPPSLQEIILKILEYAVTVVNCIPEQELLSLCCLL 585

Query: 221 XQPITSELKHTIVSFFVKLLSFDQQYKKXXXXXXXXXXXXXXLKQHKFLSGSEQYNKSTG 42
            QPITSELKHTI+SFFVKLLSFDQQYKK              LKQHKFL G++Q+N +  
Sbjct: 586 QQPITSELKHTILSFFVKLLSFDQQYKKVLREVGVLEVLLDDLKQHKFLLGADQHNGNPD 645

Query: 41  ELERKSSSSSFKK 3
           +LERKSSS  FKK
Sbjct: 646 QLERKSSSGGFKK 658


>ref|XP_004146964.1| PREDICTED: uncharacterized protein LOC101220609 [Cucumis sativus]
          Length = 3611

 Score =  159 bits (402), Expect = 2e-37
 Identities = 87/133 (65%), Positives = 94/133 (70%)
 Frame = -3

Query: 401 SSHLDNYKLCQQLRTVPLFILNMAGFPPSLQDIILKILEYAVTVVNCVPXXXXXXXXXXX 222
           SSHL+NYKLCQQLRTVPL ILNMAGFP SLQ+IILKILEYAVTVVNCVP           
Sbjct: 534 SSHLENYKLCQQLRTVPLLILNMAGFPSSLQEIILKILEYAVTVVNCVPEQELLSLCCLL 593

Query: 221 XQPITSELKHTIVSFFVKLLSFDQQYKKXXXXXXXXXXXXXXLKQHKFLSGSEQYNKSTG 42
            QPI SELKHTI+SFFVKLLSFD  YKK              LKQHKFL   +Q   +  
Sbjct: 594 QQPIMSELKHTILSFFVKLLSFDHHYKKVLREVGVLEVLLDDLKQHKFLQSPDQAGGNFH 653

Query: 41  ELERKSSSSSFKK 3
           +LERKSS+SSFKK
Sbjct: 654 QLERKSSTSSFKK 666


>ref|XP_002892146.1| hypothetical protein ARALYDRAFT_311407 [Arabidopsis lyrata subsp.
           lyrata] gi|297337988|gb|EFH68405.1| hypothetical protein
           ARALYDRAFT_311407 [Arabidopsis lyrata subsp. lyrata]
          Length = 3606

 Score =  158 bits (399), Expect = 5e-37
 Identities = 82/133 (61%), Positives = 95/133 (71%)
 Frame = -3

Query: 401 SSHLDNYKLCQQLRTVPLFILNMAGFPPSLQDIILKILEYAVTVVNCVPXXXXXXXXXXX 222
           SSH++NY+LCQ+LRTVPL +LNMAGFP SLQDIILKILEYAVTVVNC+P           
Sbjct: 529 SSHVENYRLCQELRTVPLLVLNMAGFPSSLQDIILKILEYAVTVVNCIPEQELLSLCCLL 588

Query: 221 XQPITSELKHTIVSFFVKLLSFDQQYKKXXXXXXXXXXXXXXLKQHKFLSGSEQYNKSTG 42
            QPITS+LKHTI+SFFVKL+SFDQQYKK              LKQHK L G +QY+  + 
Sbjct: 589 QQPITSQLKHTILSFFVKLISFDQQYKKVLREVGVLEVLQDDLKQHKLLIGPDQYSGVSN 648

Query: 41  ELERKSSSSSFKK 3
             +RK SS SFKK
Sbjct: 649 HSDRKPSSGSFKK 661


Top