BLASTX nr result

ID: Coptis24_contig00030728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030728
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523213.1| serine-threonine protein kinase, plant-type,...   116   2e-24
ref|XP_002525575.1| serine-threonine protein kinase, plant-type,...   115   4e-24
ref|XP_002298149.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_002272787.2| PREDICTED: inactive protein kinase SELMODRAF...   105   5e-21
emb|CAN78896.1| hypothetical protein VITISV_025420 [Vitis vinifera]   105   5e-21

>ref|XP_002523213.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223537509|gb|EEF39134.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 546

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/94 (59%), Positives = 72/94 (76%)
 Frame = -3

Query: 336 QVEFMIAVIAGSSPKAVAIQASNRLKATWVILDRQMKKDKKYFMEKLSCGISRMKRDNSV 157
           +V F I V  G SPK VA++A+  LKATWVILDRQMK+D+KYF+ KLSCGISRMKR+N +
Sbjct: 107 KVVFKIEVATGPSPKVVALKAAENLKATWVILDRQMKRDRKYFLAKLSCGISRMKRNNMI 166

Query: 156 EQLRGPKVIVINKTLNEGSRCSNVTYDEMLPGTP 55
           +QLRGPK +     L + +  S +TYD+M+PGTP
Sbjct: 167 KQLRGPKPMPKYTPLKKENLSSLITYDDMVPGTP 200


>ref|XP_002525575.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223535154|gb|EEF36834.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 726

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/96 (60%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
 Frame = -3

Query: 336 QVEFMIAVIAGSSPKAVAIQASNRLKATWVILDRQMKKDKKYFMEKLSCGISRMKRDNSV 157
           Q+EF I V AG++PK VAI+A+  LKATW++LDR +K+DKKYF+EKL CGISRMKRDN+V
Sbjct: 111 QIEFNIEVRAGAAPKVVAIKAAKYLKATWIVLDRHLKRDKKYFIEKLQCGISRMKRDNTV 170

Query: 156 EQLRGPK--VIVINKTLNEGSRCSNVTYDEMLPGTP 55
           E LRGPK  V  I+         S V YDEM+PG+P
Sbjct: 171 EVLRGPKARVTTISPPERTIQTKSQVKYDEMIPGSP 206


>ref|XP_002298149.1| predicted protein [Populus trichocarpa] gi|222845407|gb|EEE82954.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/95 (57%), Positives = 70/95 (73%), Gaps = 2/95 (2%)
 Frame = -3

Query: 336 QVEFMIAVIAGSSPKAVAIQASNRLKATWVILDRQMKKDKKYFMEKLSCGISRMKRDNSV 157
           QVE  I V  G SPK VA++ +  LKATW+ILDR MKKD+KYF+ KLSCGISRMKR+NS+
Sbjct: 146 QVELKIEVATGPSPKTVALKIAQDLKATWIILDRTMKKDRKYFLRKLSCGISRMKRNNSI 205

Query: 156 EQLRGPKVIVINKTLNEGSRCSNV--TYDEMLPGT 58
           EQLRGPK    +   N+  R  N+  +YDE++PG+
Sbjct: 206 EQLRGPK---DSTEANQNERVRNICLSYDEIIPGS 237


>ref|XP_002272787.2| PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Vitis
           vinifera]
          Length = 714

 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/66 (72%), Positives = 59/66 (89%)
 Frame = -3

Query: 336 QVEFMIAVIAGSSPKAVAIQASNRLKATWVILDRQMKKDKKYFMEKLSCGISRMKRDNSV 157
           ++ F I V+AG+SPKAVA++A    KATWV+LDRQMKKDKKYFM+KLSCGISRMKRDN++
Sbjct: 109 KIGFHIRVLAGASPKAVALKAVKSAKATWVVLDRQMKKDKKYFMDKLSCGISRMKRDNTI 168

Query: 156 EQLRGP 139
           E+LRGP
Sbjct: 169 EELRGP 174


>emb|CAN78896.1| hypothetical protein VITISV_025420 [Vitis vinifera]
          Length = 648

 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/66 (72%), Positives = 59/66 (89%)
 Frame = -3

Query: 336 QVEFMIAVIAGSSPKAVAIQASNRLKATWVILDRQMKKDKKYFMEKLSCGISRMKRDNSV 157
           ++ F I V+AG+SPKAVA++A    KATWV+LDRQMKKDKKYFM+KLSCGISRMKRDN++
Sbjct: 55  KIGFHIRVLAGASPKAVALKAVKSAKATWVVLDRQMKKDKKYFMDKLSCGISRMKRDNTI 114

Query: 156 EQLRGP 139
           E+LRGP
Sbjct: 115 EELRGP 120


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