BLASTX nr result
ID: Coptis24_contig00030720
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030720 (578 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 51 1e-12 emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera] 54 1e-11 emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 47 1e-09 emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 44 6e-09 emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 42 2e-08 >emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] Length = 1131 Score = 51.2 bits (121), Expect(2) = 1e-12 Identities = 21/38 (55%), Positives = 29/38 (76%) Frame = -1 Query: 119 DTSWIADTGATNHITSDLSNLSFHQDYGGSDKVLVGDG 6 D SW DTGAT+H+T +L+ L+ H + GSDKV+VG+G Sbjct: 297 DESWYMDTGATHHLTPNLNKLNSHTPFAGSDKVMVGNG 334 Score = 46.6 bits (109), Expect(2) = 1e-12 Identities = 19/51 (37%), Positives = 32/51 (62%) Frame = -2 Query: 382 RGSYTQSDYTTNTQKTCDLTVNPTGRIQCQICGRVGHSAIDCYNRMNHSYQ 230 RGS+ Y++ +++ G+ QCQ+CG+ GH AI+CY+R + +YQ Sbjct: 230 RGSFNNHSYSSRNFN--NVSGGSNGKPQCQVCGKYGHIAINCYHRFDQTYQ 278 >emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera] Length = 456 Score = 53.5 bits (127), Expect(2) = 1e-11 Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 6/51 (11%) Frame = -2 Query: 307 RIQCQICGRVGHSAIDCYNRMNHSYQGKQAPSKLQAIAVQ------RQHQF 173 R CQIC R H A+DCYNRMN+++QG+ P +L A+ V+ QHQ+ Sbjct: 285 RSPCQICKRENHQALDCYNRMNYAFQGRHPPIELVAMVVEANTTYLNQHQW 335 Score = 41.2 bits (95), Expect(2) = 1e-11 Identities = 18/35 (51%), Positives = 23/35 (65%) Frame = -1 Query: 110 WIADTGATNHITSDLSNLSFHQDYGGSDKVLVGDG 6 W D+GA H+TSD NL+ Q Y G+D V VG+G Sbjct: 335 WYVDSGANIHVTSDTVNLAISQPYEGTDTVGVGNG 369 >emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] Length = 1449 Score = 46.6 bits (109), Expect(2) = 1e-09 Identities = 20/39 (51%), Positives = 28/39 (71%) Frame = -1 Query: 119 DTSWIADTGATNHITSDLSNLSFHQDYGGSDKVLVGDGK 3 D +W DTGAT+H++ + LS Q Y G+DKV+VG+GK Sbjct: 375 DEAWFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGNGK 413 Score = 41.2 bits (95), Expect(2) = 1e-09 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = -2 Query: 379 GSYTQSDYTTNTQKTCDLTVNPTGRIQCQICGRVGHSAIDCYNRMNHSYQG 227 G QS + T + + R QCQ+CG+ GH+ + CY+R + ++QG Sbjct: 294 GQNRQSGFNTRRGTNGGRSQSSQHRPQCQLCGKFGHTVVRCYHRFDINFQG 344 >emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] Length = 1424 Score = 43.9 bits (102), Expect(2) = 6e-09 Identities = 18/39 (46%), Positives = 27/39 (69%) Frame = -1 Query: 119 DTSWIADTGATNHITSDLSNLSFHQDYGGSDKVLVGDGK 3 D +W D+GAT+H+T +L+NL + SD+V VG+GK Sbjct: 350 DNNWYPDSGATHHLTPNLNNLLTKSQFPSSDEVFVGNGK 388 Score = 41.6 bits (96), Expect(2) = 6e-09 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = -2 Query: 301 QCQICGRVGHSAIDCYNRMNHSYQGKQAPSKLQ 203 QCQ+CGR+GH + CY R + S+ G PS+LQ Sbjct: 285 QCQLCGRIGHVVMQCYYRFDQSFTG---PSQLQ 314 >emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] Length = 1271 Score = 42.4 bits (98), Expect(2) = 2e-08 Identities = 18/37 (48%), Positives = 26/37 (70%) Frame = -1 Query: 119 DTSWIADTGATNHITSDLSNLSFHQDYGGSDKVLVGD 9 D +W DTGAT+H++ + LS Q Y G+DKV+VG+ Sbjct: 425 DEAWFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGN 461 Score = 41.2 bits (95), Expect(2) = 2e-08 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = -2 Query: 379 GSYTQSDYTTNTQKTCDLTVNPTGRIQCQICGRVGHSAIDCYNRMNHSYQG 227 G QS + T + + R QCQ+CG+ GH+ + CY+R + ++QG Sbjct: 344 GQNRQSGFNTRRGTNGGRSQSSQHRPQCQLCGKFGHTVVRCYHRFDINFQG 394