BLASTX nr result

ID: Coptis24_contig00030720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030720
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    51   1e-12
emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera]    54   1e-11
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    47   1e-09
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]    44   6e-09
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]    42   2e-08

>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 51.2 bits (121), Expect(2) = 1e-12
 Identities = 21/38 (55%), Positives = 29/38 (76%)
 Frame = -1

Query: 119 DTSWIADTGATNHITSDLSNLSFHQDYGGSDKVLVGDG 6
           D SW  DTGAT+H+T +L+ L+ H  + GSDKV+VG+G
Sbjct: 297 DESWYMDTGATHHLTPNLNKLNSHTPFAGSDKVMVGNG 334



 Score = 46.6 bits (109), Expect(2) = 1e-12
 Identities = 19/51 (37%), Positives = 32/51 (62%)
 Frame = -2

Query: 382 RGSYTQSDYTTNTQKTCDLTVNPTGRIQCQICGRVGHSAIDCYNRMNHSYQ 230
           RGS+    Y++      +++    G+ QCQ+CG+ GH AI+CY+R + +YQ
Sbjct: 230 RGSFNNHSYSSRNFN--NVSGGSNGKPQCQVCGKYGHIAINCYHRFDQTYQ 278


>emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera]
          Length = 456

 Score = 53.5 bits (127), Expect(2) = 1e-11
 Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 6/51 (11%)
 Frame = -2

Query: 307 RIQCQICGRVGHSAIDCYNRMNHSYQGKQAPSKLQAIAVQ------RQHQF 173
           R  CQIC R  H A+DCYNRMN+++QG+  P +L A+ V+       QHQ+
Sbjct: 285 RSPCQICKRENHQALDCYNRMNYAFQGRHPPIELVAMVVEANTTYLNQHQW 335



 Score = 41.2 bits (95), Expect(2) = 1e-11
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = -1

Query: 110 WIADTGATNHITSDLSNLSFHQDYGGSDKVLVGDG 6
           W  D+GA  H+TSD  NL+  Q Y G+D V VG+G
Sbjct: 335 WYVDSGANIHVTSDTVNLAISQPYEGTDTVGVGNG 369


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 46.6 bits (109), Expect(2) = 1e-09
 Identities = 20/39 (51%), Positives = 28/39 (71%)
 Frame = -1

Query: 119 DTSWIADTGATNHITSDLSNLSFHQDYGGSDKVLVGDGK 3
           D +W  DTGAT+H++  +  LS  Q Y G+DKV+VG+GK
Sbjct: 375 DEAWFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGNGK 413



 Score = 41.2 bits (95), Expect(2) = 1e-09
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -2

Query: 379 GSYTQSDYTTNTQKTCDLTVNPTGRIQCQICGRVGHSAIDCYNRMNHSYQG 227
           G   QS + T        + +   R QCQ+CG+ GH+ + CY+R + ++QG
Sbjct: 294 GQNRQSGFNTRRGTNGGRSQSSQHRPQCQLCGKFGHTVVRCYHRFDINFQG 344


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score = 43.9 bits (102), Expect(2) = 6e-09
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = -1

Query: 119 DTSWIADTGATNHITSDLSNLSFHQDYGGSDKVLVGDGK 3
           D +W  D+GAT+H+T +L+NL     +  SD+V VG+GK
Sbjct: 350 DNNWYPDSGATHHLTPNLNNLLTKSQFPSSDEVFVGNGK 388



 Score = 41.6 bits (96), Expect(2) = 6e-09
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = -2

Query: 301 QCQICGRVGHSAIDCYNRMNHSYQGKQAPSKLQ 203
           QCQ+CGR+GH  + CY R + S+ G   PS+LQ
Sbjct: 285 QCQLCGRIGHVVMQCYYRFDQSFTG---PSQLQ 314


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score = 42.4 bits (98), Expect(2) = 2e-08
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = -1

Query: 119 DTSWIADTGATNHITSDLSNLSFHQDYGGSDKVLVGD 9
           D +W  DTGAT+H++  +  LS  Q Y G+DKV+VG+
Sbjct: 425 DEAWFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGN 461



 Score = 41.2 bits (95), Expect(2) = 2e-08
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -2

Query: 379 GSYTQSDYTTNTQKTCDLTVNPTGRIQCQICGRVGHSAIDCYNRMNHSYQG 227
           G   QS + T        + +   R QCQ+CG+ GH+ + CY+R + ++QG
Sbjct: 344 GQNRQSGFNTRRGTNGGRSQSSQHRPQCQLCGKFGHTVVRCYHRFDINFQG 394


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