BLASTX nr result

ID: Coptis24_contig00030585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030585
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635410.1| PREDICTED: LOW QUALITY PROTEIN: patatin grou...   200   1e-49
ref|XP_003527713.1| PREDICTED: patatin group A-3-like [Glycine max]   196   1e-48
ref|XP_003523595.1| PREDICTED: LOW QUALITY PROTEIN: patatin grou...   196   1e-48
emb|CBI25857.3| unnamed protein product [Vitis vinifera]              196   2e-48
gb|AAF98369.1|AF158253_1 patatin-like protein 3 [Nicotiana tabacum]   195   3e-48

>ref|XP_003635410.1| PREDICTED: LOW QUALITY PROTEIN: patatin group A-3-like [Vitis
           vinifera]
          Length = 388

 Score =  200 bits (508), Expect = 1e-49
 Identities = 97/144 (67%), Positives = 121/144 (84%)
 Frame = -2

Query: 432 KMVTLLSIDGGGVRGLIPATILSFLESKLQELDGVDARIADYFDLVAGTSTGGLVTIMLT 253
           +MVT+LSIDGGG+RG+IP T+L+FLESKLQELDG +ARIADYFD++AGTSTGGLVT MLT
Sbjct: 9   RMVTVLSIDGGGIRGIIPGTLLAFLESKLQELDGANARIADYFDIIAGTSTGGLVTSMLT 68

Query: 252 VPNKENRPLYMAKEVINFYLDNCPKIFPQNAKNMILGPVKSLFGAIAGPKYNGKFLRTKV 73
            PNK+NRP+Y AK++ NFYL++CPKIFPQN+ N    P  S+ GA  GPKY+GK+LR+  
Sbjct: 69  APNKDNRPIYAAKDINNFYLEHCPKIFPQNSTN----PNTSVSGA-TGPKYDGKYLRSLT 123

Query: 72  REVLGETKLHQTLTNILIPAFDIK 1
            E+LG+  L QTLTN++IP FDIK
Sbjct: 124 DELLGDLTLKQTLTNVVIPTFDIK 147


>ref|XP_003527713.1| PREDICTED: patatin group A-3-like [Glycine max]
          Length = 414

 Score =  196 bits (499), Expect = 1e-48
 Identities = 92/143 (64%), Positives = 121/143 (84%)
 Frame = -2

Query: 429 MVTLLSIDGGGVRGLIPATILSFLESKLQELDGVDARIADYFDLVAGTSTGGLVTIMLTV 250
           +VT+LSIDGGG+RG+IPATIL+FLE++LQELDG DAR+ADYFD++AGTSTGG+VT ML+ 
Sbjct: 19  LVTILSIDGGGIRGIIPATILAFLEAQLQELDGEDARLADYFDVIAGTSTGGIVTAMLSA 78

Query: 249 PNKENRPLYMAKEVINFYLDNCPKIFPQNAKNMILGPVKSLFGAIAGPKYNGKFLRTKVR 70
           PN   RPL+ AK++  FYL++CPKIFPQ++   + G V  L G++ GPKY+GK+L+  VR
Sbjct: 79  PNDNQRPLFAAKDIKPFYLEHCPKIFPQHSG--LWGSVGKLLGSLGGPKYDGKYLKEVVR 136

Query: 69  EVLGETKLHQTLTNILIPAFDIK 1
           E LG+T+LH+TLTNI+IP FDIK
Sbjct: 137 EKLGQTRLHETLTNIVIPTFDIK 159


>ref|XP_003523595.1| PREDICTED: LOW QUALITY PROTEIN: patatin group A-3-like [Glycine
           max]
          Length = 292

 Score =  196 bits (499), Expect = 1e-48
 Identities = 93/143 (65%), Positives = 120/143 (83%)
 Frame = -2

Query: 429 MVTLLSIDGGGVRGLIPATILSFLESKLQELDGVDARIADYFDLVAGTSTGGLVTIMLTV 250
           +VT+LSIDGGG+RG+IPATIL+FLE++LQELDG DAR+ADYFD++AGTSTGG+VT MLT 
Sbjct: 19  LVTILSIDGGGIRGIIPATILAFLEAQLQELDGEDARLADYFDVIAGTSTGGIVTAMLTA 78

Query: 249 PNKENRPLYMAKEVINFYLDNCPKIFPQNAKNMILGPVKSLFGAIAGPKYNGKFLRTKVR 70
           PN   RPL+ AK++  FYL++CPKIFPQ++   + G V  L  ++ GPKYNGK+L+  VR
Sbjct: 79  PNDNQRPLFAAKDIKPFYLEHCPKIFPQHSG--LWGSVGKLLRSLGGPKYNGKYLQEVVR 136

Query: 69  EVLGETKLHQTLTNILIPAFDIK 1
           E +GET+LH+TLTNI+IP FDIK
Sbjct: 137 EKVGETRLHETLTNIVIPTFDIK 159


>emb|CBI25857.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score =  196 bits (497), Expect = 2e-48
 Identities = 96/145 (66%), Positives = 119/145 (82%), Gaps = 2/145 (1%)
 Frame = -2

Query: 429 MVTLLSIDGGGVRGLIPATILSFLESKLQELDGVDARIADYFDLVAGTSTGGLVTIMLTV 250
           MVT+LSIDGGG+RG+IP T+L+FLESKLQELDG +ARIADYFD++AGTSTGGLVT MLT 
Sbjct: 1   MVTVLSIDGGGIRGIIPGTLLAFLESKLQELDGANARIADYFDIIAGTSTGGLVTSMLTA 60

Query: 249 PNKENRPLYMAKEVINFYLDNCPKIFPQNA--KNMILGPVKSLFGAIAGPKYNGKFLRTK 76
           PNK+NRP+Y AK++ NFYL++CPKIFPQN     +   P  S+ GA  GPKY+GK+LR+ 
Sbjct: 61  PNKDNRPIYAAKDINNFYLEHCPKIFPQNRCFYGISTNPNTSVSGA-TGPKYDGKYLRSL 119

Query: 75  VREVLGETKLHQTLTNILIPAFDIK 1
             E+LG+  L QTLTN++IP FDIK
Sbjct: 120 TDELLGDLTLKQTLTNVVIPTFDIK 144


>gb|AAF98369.1|AF158253_1 patatin-like protein 3 [Nicotiana tabacum]
          Length = 411

 Score =  195 bits (496), Expect = 3e-48
 Identities = 91/144 (63%), Positives = 119/144 (82%)
 Frame = -2

Query: 432 KMVTLLSIDGGGVRGLIPATILSFLESKLQELDGVDARIADYFDLVAGTSTGGLVTIMLT 253
           KMVT+LS+DGGG+RG+IP T+L+FLESKLQELDG +AR+ADYFD+VAGTSTGGL+T MLT
Sbjct: 31  KMVTVLSVDGGGIRGIIPGTVLAFLESKLQELDGPNARLADYFDVVAGTSTGGLITTMLT 90

Query: 252 VPNKENRPLYMAKEVINFYLDNCPKIFPQNAKNMILGPVKSLFGAIAGPKYNGKFLRTKV 73
            PNK+NRPLY AK++ NFY+++ P+IFPQ+ +N  +  V +LFG   GPKY+GK+LR+ +
Sbjct: 91  APNKDNRPLYQAKDISNFYMEHGPQIFPQSRRNSFVRRVTNLFG---GPKYDGKYLRSII 147

Query: 72  REVLGETKLHQTLTNILIPAFDIK 1
             +LG   + QTLTN +IP FDIK
Sbjct: 148 NSILGNLTMKQTLTNTIIPTFDIK 171


Top