BLASTX nr result

ID: Coptis24_contig00030521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030521
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272128.1| PREDICTED: uncharacterized protein LOC100262...    63   3e-08
ref|XP_003535605.1| PREDICTED: uncharacterized protein LOC100799...    55   8e-06

>ref|XP_002272128.1| PREDICTED: uncharacterized protein LOC100262848 [Vitis vinifera]
           gi|302143836|emb|CBI22697.3| unnamed protein product
           [Vitis vinifera]
          Length = 703

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
 Frame = +2

Query: 8   QVKTGSGRRRQIITRRPVSCSQRCATNGYHV----VVTKLGPVQRQGVHRDQRSTSLTNG 175
           +V  G G R  I  RR V  SQR A NG+H      ++K G +Q+   HRD R+  + N 
Sbjct: 378 RVAYGVGCRHLIKMRRQVPKSQRGAPNGFHADQNPQISKFGAIQKHATHRDPRAVPVVNN 437

Query: 176 HKIWTRKTKPDEEGE 220
           +K+WTRK K + EGE
Sbjct: 438 NKVWTRKPKSENEGE 452


>ref|XP_003535605.1| PREDICTED: uncharacterized protein LOC100799153 [Glycine max]
          Length = 667

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
 Frame = +2

Query: 8   QVKTGSGRRRQIITR-RPVSCSQRCATNGYHV----VVTKLGPVQRQGVHRDQRSTSLTN 172
           Q   G  RRR +  R + +  SQ    NG H      ++KLG +Q+ G +RDQR+  + N
Sbjct: 367 QASRGHNRRRIMAARWQGLPKSQWAKANGSHAGQNSQMSKLGVIQKHGTNRDQRAAPIVN 426

Query: 173 GHKIWTRKTKPDEEG 217
           G K+W+RK KP+  G
Sbjct: 427 GSKVWSRKPKPETNG 441


Top