BLASTX nr result

ID: Coptis24_contig00030476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030476
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADF80900.1| terminal flower 1 [Vitis mustangensis]                 278   7e-73
ref|XP_002276820.1| PREDICTED: TFL1A protein [Vitis vinifera] gi...   278   9e-73
gb|ACY80737.1| TFL1A protein [Vitis vinifera]                         276   3e-72
gb|AAM46142.1|AF378127_1 terminal flower-like protein 1 [Vitis v...   276   3e-72
gb|AFA42328.1| TFL1-like protein [Fragaria x ananassa] gi|375330...   275   6e-72

>gb|ADF80900.1| terminal flower 1 [Vitis mustangensis]
          Length = 173

 Score =  278 bits (712), Expect = 7e-73
 Identities = 129/165 (78%), Positives = 150/165 (90%)
 Frame = -2

Query: 674 MARMSHPLIVGGVIGDVLDSFSPTVLMTITYNNNKQVSNGHELYPSSVTTKPKVEIPGGD 495
           MARMS PLIVGGVIGDV+DSF  TV MT+TYN+NKQV NGHEL+PSSVT KPK+E+ GGD
Sbjct: 1   MARMSDPLIVGGVIGDVVDSFCSTVKMTVTYNSNKQVYNGHELFPSSVTIKPKIEVEGGD 60

Query: 494 MRSFFTLVLTDPDVPGPSDPYLKERLHWIVTDIPGTTDATFGNEVISYEIPKPYIGIHRF 315
           MRSFFTL++TDPDVPGPSDPYL+E LHWIVTDIPGTTD+TFG E+++YE+P+P IGIH F
Sbjct: 61  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSTFGREIVNYEMPRPNIGIHGF 120

Query: 314 VFVLFKQKRRQSVIPPSSRDHFNTKKFAEDNELGLPVAAVYFNAQ 180
           VF+LFKQKRRQ+V PPSSRD F+T+ FAE+NELG PVAAV+FNAQ
Sbjct: 121 VFLLFKQKRRQTVNPPSSRDRFSTRNFAEENELGPPVAAVFFNAQ 165


>ref|XP_002276820.1| PREDICTED: TFL1A protein [Vitis vinifera]
           gi|115503904|gb|ABI99466.1| TFL1A protein [Vitis
           vinifera] gi|147779503|emb|CAN69924.1| hypothetical
           protein VITISV_019378 [Vitis vinifera]
           gi|267847207|gb|ACY80736.1| TFL1A protein [Vitis
           vinifera] gi|295148795|gb|ADF80895.1| terminal flower 1
           [Vitis aestivalis] gi|295148799|gb|ADF80897.1| terminal
           flower 1 [Vitis cinerea] gi|295148809|gb|ADF80902.1|
           terminal flower 1 [Vitis riparia]
           gi|296084926|emb|CBI28335.3| unnamed protein product
           [Vitis vinifera]
          Length = 173

 Score =  278 bits (711), Expect = 9e-73
 Identities = 129/165 (78%), Positives = 150/165 (90%)
 Frame = -2

Query: 674 MARMSHPLIVGGVIGDVLDSFSPTVLMTITYNNNKQVSNGHELYPSSVTTKPKVEIPGGD 495
           MARMS PLIVG VIGDV+DSF  TV MT+TYN+NKQV NGHEL+PSSVT KPK+E+ GGD
Sbjct: 1   MARMSDPLIVGRVIGDVVDSFCSTVKMTVTYNSNKQVYNGHELFPSSVTIKPKIEVEGGD 60

Query: 494 MRSFFTLVLTDPDVPGPSDPYLKERLHWIVTDIPGTTDATFGNEVISYEIPKPYIGIHRF 315
           MRSFFTL++TDPDVPGPSDPYL+E LHWIVTDIPGTTD+TFG E+++YE+P+P IGIHRF
Sbjct: 61  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSTFGREIVNYEMPRPNIGIHRF 120

Query: 314 VFVLFKQKRRQSVIPPSSRDHFNTKKFAEDNELGLPVAAVYFNAQ 180
           VF+LFKQKRRQ+V PPSSRD F+T+ FAE+NELG PVAAV+FNAQ
Sbjct: 121 VFLLFKQKRRQTVNPPSSRDRFSTRNFAEENELGPPVAAVFFNAQ 165


>gb|ACY80737.1| TFL1A protein [Vitis vinifera]
          Length = 173

 Score =  276 bits (707), Expect = 3e-72
 Identities = 128/165 (77%), Positives = 150/165 (90%)
 Frame = -2

Query: 674 MARMSHPLIVGGVIGDVLDSFSPTVLMTITYNNNKQVSNGHELYPSSVTTKPKVEIPGGD 495
           MARM+ PLIVG VIGDV+DSF  TV MT+TYN+NKQV NGHEL+PSSVT KPK+E+ GGD
Sbjct: 1   MARMTDPLIVGRVIGDVVDSFCSTVKMTVTYNSNKQVYNGHELFPSSVTIKPKIEVEGGD 60

Query: 494 MRSFFTLVLTDPDVPGPSDPYLKERLHWIVTDIPGTTDATFGNEVISYEIPKPYIGIHRF 315
           MRSFFTL++TDPDVPGPSDPYL+E LHWIVTDIPGTTD+TFG E+++YE+P+P IGIHRF
Sbjct: 61  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSTFGREIVNYEMPRPNIGIHRF 120

Query: 314 VFVLFKQKRRQSVIPPSSRDHFNTKKFAEDNELGLPVAAVYFNAQ 180
           VF+LFKQKRRQ+V PPSSRD F+T+ FAE+NELG PVAAV+FNAQ
Sbjct: 121 VFLLFKQKRRQTVNPPSSRDRFSTRTFAEENELGPPVAAVFFNAQ 165


>gb|AAM46142.1|AF378127_1 terminal flower-like protein 1 [Vitis vinifera]
          Length = 173

 Score =  276 bits (707), Expect = 3e-72
 Identities = 128/165 (77%), Positives = 150/165 (90%)
 Frame = -2

Query: 674 MARMSHPLIVGGVIGDVLDSFSPTVLMTITYNNNKQVSNGHELYPSSVTTKPKVEIPGGD 495
           MARMS PLIVG VIGDV+DSF  TV MT+TYN+NKQV NGHEL+PSSVT KPK+E+ GGD
Sbjct: 1   MARMSDPLIVGRVIGDVVDSFCSTVKMTVTYNSNKQVYNGHELFPSSVTIKPKIEVEGGD 60

Query: 494 MRSFFTLVLTDPDVPGPSDPYLKERLHWIVTDIPGTTDATFGNEVISYEIPKPYIGIHRF 315
           MRSFFTL++TDPDVPGPSDPYL+E LHWIVTDIPGTTD+TFG E+++YE+P+P IGIHRF
Sbjct: 61  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSTFGREIVNYEMPRPNIGIHRF 120

Query: 314 VFVLFKQKRRQSVIPPSSRDHFNTKKFAEDNELGLPVAAVYFNAQ 180
           VF+LFKQKRRQ+V PPSSRD F+++ FAE+NELG PVAAV+FNAQ
Sbjct: 121 VFLLFKQKRRQTVNPPSSRDRFSSRNFAEENELGPPVAAVFFNAQ 165


>gb|AFA42328.1| TFL1-like protein [Fragaria x ananassa] gi|375330868|gb|AFA52237.1|
           TFL1-like protein [Fragaria x ananassa]
          Length = 172

 Score =  275 bits (704), Expect = 6e-72
 Identities = 133/165 (80%), Positives = 146/165 (88%)
 Frame = -2

Query: 674 MARMSHPLIVGGVIGDVLDSFSPTVLMTITYNNNKQVSNGHELYPSSVTTKPKVEIPGGD 495
           MARMS PL VG VIGDVLDSF+PT  M +TYN  K V NGHEL+PS+VT KP+VEI GGD
Sbjct: 1   MARMSEPLAVGRVIGDVLDSFTPTTKMIVTYNT-KLVCNGHELFPSAVTAKPRVEIQGGD 59

Query: 494 MRSFFTLVLTDPDVPGPSDPYLKERLHWIVTDIPGTTDATFGNEVISYEIPKPYIGIHRF 315
           MRSFFTLV+TDPDVPGPSDPYLKE LHWIVTDIPGTTDATFG EV+SYE+P+P IGIHRF
Sbjct: 60  MRSFFTLVMTDPDVPGPSDPYLKEHLHWIVTDIPGTTDATFGREVVSYEMPRPNIGIHRF 119

Query: 314 VFVLFKQKRRQSVIPPSSRDHFNTKKFAEDNELGLPVAAVYFNAQ 180
           VFVLF QKRRQSV PPSSRDHFNT+ FA +N+LG+PVAAVYFNAQ
Sbjct: 120 VFVLFMQKRRQSVNPPSSRDHFNTRTFAAENDLGVPVAAVYFNAQ 164


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