BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030472
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37645.3| unnamed protein product [Vitis vinifera]              110   2e-33
ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-li...   110   6e-33
ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-li...   107   3e-32
sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein              104   1e-31
ref|XP_002272299.1| PREDICTED: high mobility group-like isoform ...   105   2e-31

>emb|CBI37645.3| unnamed protein product [Vitis vinifera]
          Length = 154

 Score =  110 bits (274), Expect(2) = 2e-33
 Identities = 52/64 (81%), Positives = 57/64 (89%)
 Frame = +2

Query: 185 EEFRKTYKEKFPLNKSVAVVGKAGGDKWKSLSDAEKAPYVAKAEKRKTEYTKILQAYNDK 364
           EEFRK YKEK P NKSV+VVGKAGGDKWKSLS+AEKAPYVAKAEKRKTEY K +QAYN +
Sbjct: 57  EEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKR 116

Query: 365 LANG 376
           +A G
Sbjct: 117 MAEG 120



 Score = 57.8 bits (138), Expect(2) = 2e-33
 Identities = 30/45 (66%), Positives = 34/45 (75%), Gaps = 8/45 (17%)
 Frame = +3

Query: 18  KTADNKL--------AVNRRASKKEKAVKDPNKPKRPASAFFVFM 128
           K AD+KL        AV ++ +KKEKAVKDPNKPKRPASAFFVFM
Sbjct: 12  KRADSKLSVKKKGAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFM 56


>ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
           vinifera]
          Length = 156

 Score =  110 bits (274), Expect(2) = 6e-33
 Identities = 52/64 (81%), Positives = 57/64 (89%)
 Frame = +2

Query: 185 EEFRKTYKEKFPLNKSVAVVGKAGGDKWKSLSDAEKAPYVAKAEKRKTEYTKILQAYNDK 364
           EEFRK YKEK P NKSV+VVGKAGGDKWKSLS+AEKAPYVAKAEKRKTEY K +QAYN +
Sbjct: 59  EEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKR 118

Query: 365 LANG 376
           +A G
Sbjct: 119 MAEG 122



 Score = 55.8 bits (133), Expect(2) = 6e-33
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +3

Query: 39  AVNRRASKKEKAVKDPNKPKRPASAFFVFM 128
           AV ++ +KKEKAVKDPNKPKRPASAFFVFM
Sbjct: 29  AVGKKTAKKEKAVKDPNKPKRPASAFFVFM 58


>ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-like isoform 2 [Vitis
           vinifera]
          Length = 125

 Score =  107 bits (268), Expect(2) = 3e-32
 Identities = 51/67 (76%), Positives = 57/67 (85%)
 Frame = +2

Query: 185 EEFRKTYKEKFPLNKSVAVVGKAGGDKWKSLSDAEKAPYVAKAEKRKTEYTKILQAYNDK 364
           EEFRK YKEK P NKSV+VVGKAGGDKWKSLS+AEKAPYVAKAEKRKTEY K +QAYN +
Sbjct: 59  EEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKR 118

Query: 365 LANGGDE 385
           +    +E
Sbjct: 119 MEEDDEE 125



 Score = 55.8 bits (133), Expect(2) = 3e-32
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +3

Query: 39  AVNRRASKKEKAVKDPNKPKRPASAFFVFM 128
           AV ++ +KKEKAVKDPNKPKRPASAFFVFM
Sbjct: 29  AVGKKTAKKEKAVKDPNKPKRPASAFFVFM 58


>sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein
          Length = 144

 Score =  104 bits (260), Expect(2) = 1e-31
 Identities = 51/69 (73%), Positives = 57/69 (82%)
 Frame = +2

Query: 185 EEFRKTYKEKFPLNKSVAVVGKAGGDKWKSLSDAEKAPYVAKAEKRKTEYTKILQAYNDK 364
           E+FRKTYKEK P NKSVAVVGKAGGDKWK L+ AEKAP+++KAEKRK EY K LQAYN K
Sbjct: 48  EDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKK 107

Query: 365 LANGGDEED 391
            A G  EE+
Sbjct: 108 QAAGAAEEE 116



 Score = 56.6 bits (135), Expect(2) = 1e-31
 Identities = 29/43 (67%), Positives = 34/43 (79%), Gaps = 3/43 (6%)
 Frame = +3

Query: 9   KSTKTADNKLAVNRRAS---KKEKAVKDPNKPKRPASAFFVFM 128
           KS   +DNKLAV ++A+   K +KAVKDPNKPKRP SAFFVFM
Sbjct: 5   KSKAKSDNKLAVKKQAADTKKTKKAVKDPNKPKRPPSAFFVFM 47


>ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
           gi|359491843|ref|XP_003634333.1| PREDICTED: high
           mobility group-like isoform 2 [Vitis vinifera]
           gi|297745562|emb|CBI40727.3| unnamed protein product
           [Vitis vinifera]
          Length = 153

 Score =  105 bits (261), Expect(2) = 2e-31
 Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
 Frame = +2

Query: 185 EEFRKTYKEKFPLNKSVAVVGKAGGDKWKSLSDAEKAPYVAKAEKRKTEYTKILQAYNDK 364
           EEFRK YKEK P NKSV+VVGKAGGDKWKS+S+AEKAPYVAKAEKRK EY K ++AYN K
Sbjct: 56  EEFRKQYKEKHPSNKSVSVVGKAGGDKWKSMSEAEKAPYVAKAEKRKVEYEKNMKAYNKK 115

Query: 365 LANGG---DEED 391
            A G    +EED
Sbjct: 116 QAEGTKVVEEED 127



 Score = 55.5 bits (132), Expect(2) = 2e-31
 Identities = 30/46 (65%), Positives = 33/46 (71%), Gaps = 8/46 (17%)
 Frame = +3

Query: 15  TKTADNKLAVNRRAS--------KKEKAVKDPNKPKRPASAFFVFM 128
           TK AD KL+V + A+        KKEK VKDPNKPKRPASAFFVFM
Sbjct: 10  TKKADAKLSVKKGAAATKAGKKTKKEKPVKDPNKPKRPASAFFVFM 55