BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030445
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221...    74   1e-11
emb|CBI35920.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub...    70   2e-10
ref|XP_002339506.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub...    65   6e-09

>ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221697 [Cucumis sativus]
           gi|449480549|ref|XP_004155927.1| PREDICTED:
           uncharacterized protein LOC101224839 [Cucumis sativus]
          Length = 435

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/77 (55%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = -2

Query: 229 EEKKKLACICSYITHLIKFRDQRS-ADSASAKNHYIPGILHKKNSKTFVDFDPIRKRNFP 53
           EEKKKL CI SYITHLIK++DQ S  D +SAK H IP +L +K S  F    P  +    
Sbjct: 303 EEKKKLCCIFSYITHLIKYKDQHSMGDVSSAKGHKIPSMLRQKFSSMF----PTAESRRL 358

Query: 52  SVEKQNFLISHVLVLAL 2
           S +K N LISHVLVL+L
Sbjct: 359 SADKINLLISHVLVLSL 375


>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = -2

Query: 226 EKKKLACICSYITHLIKFRDQRSADSASAKNHYIPGILHKKNSKTF-VDFDPIRKRNFPS 50
           EK  LACI SYI HL+K++D+ S D++SAK+H IPGIL++K S  F +D D  R     +
Sbjct: 260 EKTTLACIFSYINHLLKYKDRNSMDASSAKHHKIPGILNQKFSSMFALDSDSRRL----T 315

Query: 49  VEKQNFLISHVLVLAL 2
            EK++ LIS+VLVL L
Sbjct: 316 EEKKDLLISYVLVLTL 331


>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Vitis
           vinifera]
          Length = 421

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = -2

Query: 226 EKKKLACICSYITHLIKFRDQRSADSASAKNHYIPGILHKKNSKTF-VDFDPIRKRNFPS 50
           EK  LACI SYI HL+K++D+ S D++SAK+H IPGIL++K S  F +D D  R     +
Sbjct: 290 EKTTLACIFSYINHLLKYKDRNSMDASSAKHHKIPGILNQKFSSMFALDSDSRRL----T 345

Query: 49  VEKQNFLISHVLVLAL 2
            EK++ LIS+VLVL L
Sbjct: 346 EEKKDLLISYVLVLTL 361


>ref|XP_002339506.1| predicted protein [Populus trichocarpa] gi|222839699|gb|EEE78022.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
 Frame = -2

Query: 226 EKKKLACICSYITHLIKFRDQRSAD-SASAKNHYIPGILHKKNSKTFVDFDPIRKRNFPS 50
           EKK+L+CI SYITHL+KF+DQ S D +ASA+NH  P I+ +   K F  F P  +R   S
Sbjct: 341 EKKRLSCIFSYITHLLKFKDQHSMDGAASARNHQFPSIIRQ---KFFEMFKPETRR--LS 395

Query: 49  VEKQNFLISHVLVLAL 2
           V+K + LIS+VLVL L
Sbjct: 396 VDKIDLLISYVLVLTL 411


>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like
           [Glycine max]
          Length = 424

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/75 (54%), Positives = 47/75 (62%)
 Frame = -2

Query: 226 EKKKLACICSYITHLIKFRDQRSADSASAKNHYIPGILHKKNSKTFVDFDPIRKRNFPSV 47
           EKK+L+CI SYI HLIKF+DQ S D  SAK H IP IL  K S  F   +   KR  P  
Sbjct: 293 EKKQLSCIFSYINHLIKFKDQHSFDVLSAKGHKIPNILRHKFSNMFAVSE--SKRLPP-- 348

Query: 46  EKQNFLISHVLVLAL 2
           EK + LI +VLVL L
Sbjct: 349 EKISLLICYVLVLTL 363