BLASTX nr result

ID: Coptis24_contig00030435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030435
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632877.1| PREDICTED: uncharacterized protein LOC100853...   134   1e-29
emb|CAN61794.1| hypothetical protein VITISV_015800 [Vitis vinifera]   132   2e-29
ref|XP_002529173.1| conserved hypothetical protein [Ricinus comm...   122   4e-26
ref|XP_002303325.1| SAUR family protein [Populus trichocarpa] gi...   119   3e-25
ref|XP_003627379.1| SAUR family protein [Medicago truncatula] gi...    98   6e-19

>ref|XP_003632877.1| PREDICTED: uncharacterized protein LOC100853427 [Vitis vinifera]
          Length = 101

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/98 (64%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
 Frame = +3

Query: 93  MGVKASKLSKIMNGN-SYKRLKGSPLAPRGYVPVCVGVENETKCFMVHRNSLRETEFVEL 269
           MG++ASKL +I+ G  S+KRL GS +APRGYVPVCVGV++ETK F+VH  +L E +F+EL
Sbjct: 1   MGLRASKLGRIIGGRGSHKRLGGSAMAPRGYVPVCVGVDDETKRFIVHTTTLCEDDFMEL 60

Query: 270 LYRSAEEYGFHNQGVLRIPYNAKDFEEWMIKAARRRRM 383
           LYR+AEEYGF N+GVLRIPY AKDFE+WM+  A+++R+
Sbjct: 61  LYRAAEEYGFCNEGVLRIPYEAKDFEKWMVVRAKKKRV 98


>emb|CAN61794.1| hypothetical protein VITISV_015800 [Vitis vinifera]
          Length = 112

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/99 (62%), Positives = 83/99 (83%), Gaps = 1/99 (1%)
 Frame = +3

Query: 90  VMGVKASKLSKIMNGN-SYKRLKGSPLAPRGYVPVCVGVENETKCFMVHRNSLRETEFVE 266
           +MG++ASKL +I+ G  S+KRL G  +APRGYVPVCVGV++ETK F+VH  +L E +F+E
Sbjct: 11  IMGLRASKLGRIIGGRGSHKRLGGLAMAPRGYVPVCVGVDDETKRFIVHTTTLCEDDFME 70

Query: 267 LLYRSAEEYGFHNQGVLRIPYNAKDFEEWMIKAARRRRM 383
           LLYR+AEEYGF N+GVLRIPY AKDFE+WM+  A+++R+
Sbjct: 71  LLYRAAEEYGFCNEGVLRIPYEAKDFEKWMVVRAKKKRV 109


>ref|XP_002529173.1| conserved hypothetical protein [Ricinus communis]
           gi|223531351|gb|EEF33187.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 106

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/93 (61%), Positives = 71/93 (76%)
 Frame = +3

Query: 93  MGVKASKLSKIMNGNSYKRLKGSPLAPRGYVPVCVGVENETKCFMVHRNSLRETEFVELL 272
           MGV+ SKLSK++     KRL     APRGYVP+CVGV ++T+ FMVH  +L + EF+ELL
Sbjct: 1   MGVRGSKLSKLIGAKGVKRLGCPSTAPRGYVPICVGVNDDTRRFMVHTQALSDAEFLELL 60

Query: 273 YRSAEEYGFHNQGVLRIPYNAKDFEEWMIKAAR 371
            +SAEEYGF N+GVL+IP+ AKDFEEWMIK  R
Sbjct: 61  CKSAEEYGFGNKGVLKIPFEAKDFEEWMIKRTR 93


>ref|XP_002303325.1| SAUR family protein [Populus trichocarpa]
           gi|222840757|gb|EEE78304.1| SAUR family protein [Populus
           trichocarpa]
          Length = 106

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/95 (58%), Positives = 71/95 (74%), Gaps = 2/95 (2%)
 Frame = +3

Query: 93  MGVKASKLSKIMNGNSYKRLKGS--PLAPRGYVPVCVGVENETKCFMVHRNSLRETEFVE 266
           +GV A KLSK++     KRL G+  PL P+GYVP+CVG  N+T+ F+VH  +  E EF+E
Sbjct: 3   VGVIAKKLSKLIGARGVKRLGGTTTPLPPKGYVPICVGFNNDTRRFIVHTKAFGEAEFLE 62

Query: 267 LLYRSAEEYGFHNQGVLRIPYNAKDFEEWMIKAAR 371
           LLYRSAEEYGF N+G+LRI Y A+DFEEWMI  A+
Sbjct: 63  LLYRSAEEYGFDNEGILRIAYEARDFEEWMITRAK 97


>ref|XP_003627379.1| SAUR family protein [Medicago truncatula]
           gi|355521401|gb|AET01855.1| SAUR family protein
           [Medicago truncatula]
          Length = 110

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/107 (47%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
 Frame = +3

Query: 93  MGVKASKLSKIMNGNS----YKRLKGSPL-APRGYVPVCVGVENET-KCFMVHRNSLRET 254
           MG + SKL K+++G S    YKR++G  L  PRGYVP+CVG   ET K FM+H  +L + 
Sbjct: 1   MGARESKLRKLVSGGSGSPYYKRIQGPMLLVPRGYVPICVGTNEETCKRFMIHTRALGDV 60

Query: 255 EFVELLYRSAEEYGFHNQGVLRIPYNAKDFEEWMIKAARRRRMLRVL 395
            F ELL +S E YGF N+GVLRIP+ A++FEEW    + + ++ R++
Sbjct: 61  FFRELLVKSEEVYGFRNEGVLRIPFEAQEFEEWFNGRSNKIKIKRMV 107


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