BLASTX nr result

ID: Coptis24_contig00030383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030383
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518131.1| PREDICTED: uncharacterized protein LOC100792...    86   3e-15
ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002533439.1| conserved hypothetical protein [Ricinus comm...    84   2e-14
emb|CBI29820.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257...    83   2e-14

>ref|XP_003518131.1| PREDICTED: uncharacterized protein LOC100792802 [Glycine max]
          Length = 294

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/61 (72%), Positives = 48/61 (78%), Gaps = 3/61 (4%)
 Frame = -2

Query: 242 VIPVDAKSKKNGSWEGG---EVMYMRGRFERVVGNRDSEAFYMMNPDGKGGPELSIFLLR 72
           VIP+    K  GS  GG   E+MYMR RFERVVG+RDSEAFYM+NPDG GGPELSIFLLR
Sbjct: 234 VIPLLEDGKGGGSGNGGSEGELMYMRARFERVVGSRDSEAFYMLNPDGNGGPELSIFLLR 293

Query: 71  I 69
           I
Sbjct: 294 I 294


>ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|222853997|gb|EEE91544.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/58 (72%), Positives = 49/58 (84%)
 Frame = -2

Query: 242 VIPVDAKSKKNGSWEGGEVMYMRGRFERVVGNRDSEAFYMMNPDGKGGPELSIFLLRI 69
           VIPV    +K+G  EG E++YMR +FERVVG+RDSEAFYMMNP+G GGPELSIFLLRI
Sbjct: 159 VIPVVEDGRKSGGGEG-ELLYMRAKFERVVGSRDSEAFYMMNPEGNGGPELSIFLLRI 215


>ref|XP_002533439.1| conserved hypothetical protein [Ricinus communis]
           gi|223526713|gb|EEF28946.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = -2

Query: 242 VIPVDAKSKKNGSWEGGEVMYMRGRFERVVGNRDSEAFYMMNPDGKGGPELSIFLLRI 69
           VIP+    +KN   EG E++YMR +FERVVG+RDSEAFYMMNP+G GGPELSIFLLRI
Sbjct: 220 VIPMVEDGRKNAGSEG-ELLYMRAKFERVVGSRDSEAFYMMNPEGNGGPELSIFLLRI 276


>emb|CBI29820.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/58 (74%), Positives = 46/58 (79%)
 Frame = -2

Query: 242 VIPVDAKSKKNGSWEGGEVMYMRGRFERVVGNRDSEAFYMMNPDGKGGPELSIFLLRI 69
           VIP D   K     EG E++YMR RFERVVG+RDSEAFYMMNPDG GGPELSIFLLRI
Sbjct: 223 VIPTDDNRKSIVGVEG-EMLYMRARFERVVGSRDSEAFYMMNPDGTGGPELSIFLLRI 279


>ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257201 [Vitis vinifera]
          Length = 262

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/58 (74%), Positives = 46/58 (79%)
 Frame = -2

Query: 242 VIPVDAKSKKNGSWEGGEVMYMRGRFERVVGNRDSEAFYMMNPDGKGGPELSIFLLRI 69
           VIP D   K     EG E++YMR RFERVVG+RDSEAFYMMNPDG GGPELSIFLLRI
Sbjct: 206 VIPTDDNRKSIVGVEG-EMLYMRARFERVVGSRDSEAFYMMNPDGTGGPELSIFLLRI 262


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