BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030366
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275544.2| PREDICTED: F-box protein At5g52880-like [Vit...   147   1e-33
emb|CAN77760.1| hypothetical protein VITISV_034908 [Vitis vinifera]   147   1e-33
ref|XP_002513624.1| conserved hypothetical protein [Ricinus comm...   137   2e-30
ref|XP_003535587.1| PREDICTED: uncharacterized protein LOC100789...   125   5e-27
ref|XP_003592172.1| F-box protein [Medicago truncatula] gi|35548...   125   5e-27

>ref|XP_002275544.2| PREDICTED: F-box protein At5g52880-like [Vitis vinifera]
           gi|302143746|emb|CBI22607.3| unnamed protein product
           [Vitis vinifera]
          Length = 299

 Score =  147 bits (372), Expect = 1e-33
 Identities = 85/205 (41%), Positives = 112/205 (54%), Gaps = 1/205 (0%)
 Frame = +3

Query: 3   FILRSAYSKLPKNLQSILFQDTLSSFRSLPIVETHHGIEAANLLVQAAEFALPKHKKILA 182
           FILR AY+KLPKNLQS++FQDTL++FR LP ++T   + AANLL+Q+AE  LPK K+  A
Sbjct: 32  FILRGAYNKLPKNLQSLVFQDTLAAFRLLPQMQTQSAVSAANLLLQSAEAVLPKQKRTQA 91

Query: 183 VTEFKHAVVACKRRQRAQRHVEGSVEIPQDVLVHIFSFLDIRSLVAXXXXXXXXXXXXXX 362
           VTEFKHA VACKRR +A++  EG   +PQDVLVHIFSFLD++SL++              
Sbjct: 92  VTEFKHAKVACKRRSKARQEEEGLAHLPQDVLVHIFSFLDMQSLLS-------------- 137

Query: 363 XXXXXXXXXXXXXXXXXXXXXXXXXXDRRLWQSQYELXXXXXXXXXECKGQM-GKPTEKY 539
                                     D  LWQ QY +         + KG+  G+  E  
Sbjct: 138 -------------VGLACWSWNSAASDNCLWQLQYAICFGNSEDISKMKGRRDGELVEDK 184

Query: 540 MSITCNKESVDLLAIDWREAFKETY 614
                 ++      +DWR+AFK  Y
Sbjct: 185 EETKLKEDIATRTGVDWRDAFKRKY 209


>emb|CAN77760.1| hypothetical protein VITISV_034908 [Vitis vinifera]
          Length = 299

 Score =  147 bits (372), Expect = 1e-33
 Identities = 85/205 (41%), Positives = 112/205 (54%), Gaps = 1/205 (0%)
 Frame = +3

Query: 3   FILRSAYSKLPKNLQSILFQDTLSSFRSLPIVETHHGIEAANLLVQAAEFALPKHKKILA 182
           FILR AY+KLPKNLQS++FQDTL++FR LP ++T   + AANLL+Q+AE  LPK K+  A
Sbjct: 32  FILRGAYNKLPKNLQSLVFQDTLAAFRLLPQMQTQSAVSAANLLLQSAEAVLPKQKRTQA 91

Query: 183 VTEFKHAVVACKRRQRAQRHVEGSVEIPQDVLVHIFSFLDIRSLVAXXXXXXXXXXXXXX 362
           VTEFKHA VACKRR +A++  EG   +PQDVLVHIFSFLD++SL++              
Sbjct: 92  VTEFKHAKVACKRRSKARQEEEGLAHLPQDVLVHIFSFLDMQSLLS-------------- 137

Query: 363 XXXXXXXXXXXXXXXXXXXXXXXXXXDRRLWQSQYELXXXXXXXXXECKGQM-GKPTEKY 539
                                     D  LWQ QY +         + KG+  G+  E  
Sbjct: 138 -------------VGLACWSWNSAASDNCLWQLQYAICFGNSEDISKMKGRRDGELVEDK 184

Query: 540 MSITCNKESVDLLAIDWREAFKETY 614
                 ++      +DWR+AFK  Y
Sbjct: 185 EETXLKEDIATRTGVDWRDAFKRKY 209


>ref|XP_002513624.1| conserved hypothetical protein [Ricinus communis]
           gi|223547532|gb|EEF49027.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score =  137 bits (345), Expect = 2e-30
 Identities = 80/205 (39%), Positives = 113/205 (55%), Gaps = 1/205 (0%)
 Frame = +3

Query: 6   ILRSAYSKLPKNLQSILFQDTLSSFRSLPIVETHHGIEAANLLVQAAEFALPKHKKILAV 185
           IL  AY++LPKNLQSI+FQDTLS+FR LP ++T   + AA+LL+Q+AE  LPK K+ LAV
Sbjct: 29  ILGEAYNELPKNLQSIVFQDTLSAFRLLPQMQTRGAVSAAHLLLQSAEAVLPKQKRNLAV 88

Query: 186 TEFKHAVVACKRRQRAQRHVEGSVEIPQDVLVHIFSFLDIRSLVAXXXXXXXXXXXXXXX 365
            EFKHA +A KRR +A    + ++E+PQDVL+HIFSFLD++SLV+               
Sbjct: 89  KEFKHAKIAHKRRCKAHHEEDSTIELPQDVLLHIFSFLDMKSLVS--------------- 133

Query: 366 XXXXXXXXXXXXXXXXXXXXXXXXXDRRLWQSQYELXXXXXXXXXECKGQMGKPTEKYMS 545
                                    + +LW+SQY +         + +G      +K   
Sbjct: 134 ------------VELVCWSWNFAASNNQLWESQYAIFFSKKPASSKIRGLRNSRQDKDKE 181

Query: 546 ITCNKE-SVDLLAIDWREAFKETYI 617
               +E +V   +IDW+EAFK  Y+
Sbjct: 182 FALLQENTVSRTSIDWKEAFKRAYV 206


>ref|XP_003535587.1| PREDICTED: uncharacterized protein LOC100789652 [Glycine max]
          Length = 1045

 Score =  125 bits (315), Expect = 5e-27
 Identities = 63/106 (59%), Positives = 84/106 (79%)
 Frame = +3

Query: 3    FILRSAYSKLPKNLQSILFQDTLSSFRSLPIVETHHGIEAANLLVQAAEFALPKHKKILA 182
            FILR A+ + PKNLQSI+FQDTLS+FR LP ++T   + A + L+Q+ E ALPK KK +A
Sbjct: 791  FILREAFHQFPKNLQSIVFQDTLSAFRLLPEIQTQSAVSAVHFLLQSVEAALPKQKKNVA 850

Query: 183  VTEFKHAVVACKRRQRAQRHVEGSVEIPQDVLVHIFSFLDIRSLVA 320
            VTEFKHA+VA KRR +A +  +GS+ +PQD+LV IFSFLD++SLV+
Sbjct: 851  VTEFKHAMVAHKRRCKAHQVEKGSLPLPQDILVLIFSFLDMKSLVS 896


>ref|XP_003592172.1| F-box protein [Medicago truncatula] gi|355481220|gb|AES62423.1|
           F-box protein [Medicago truncatula]
          Length = 356

 Score =  125 bits (315), Expect = 5e-27
 Identities = 62/106 (58%), Positives = 83/106 (78%)
 Frame = +3

Query: 3   FILRSAYSKLPKNLQSILFQDTLSSFRSLPIVETHHGIEAANLLVQAAEFALPKHKKILA 182
           FILR A+ K PKNLQ+I+FQDTLS+FR LP +ET   + A +LL Q+ E ALPK KK +A
Sbjct: 32  FILREAFHKFPKNLQTIIFQDTLSAFRLLPQMETQSAVSAVHLLFQSVEAALPKQKKNMA 91

Query: 183 VTEFKHAVVACKRRQRAQRHVEGSVEIPQDVLVHIFSFLDIRSLVA 320
           VTEFK A++A KRR +A +  +GS+++P+D+LV IFS LD+RSLV+
Sbjct: 92  VTEFKQAMIAHKRRSKAHQVEKGSLQLPEDILVQIFSLLDMRSLVS 137