BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030294
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding pro...   110   9e-23
gb|ABK24483.1| unknown [Picea sitchensis]                             108   3e-22
ref|XP_003546771.1| PREDICTED: ruBisCO large subunit-binding pro...   103   1e-20
ref|XP_003531529.1| PREDICTED: ruBisCO large subunit-binding pro...   103   1e-20
sp|P08927.2|RUBB_PEA RecName: Full=RuBisCO large subunit-binding...   103   1e-20

>ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Vitis vinifera]
           gi|297743227|emb|CBI36094.3| unnamed protein product
           [Vitis vinifera]
          Length = 609

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/75 (74%), Positives = 61/75 (81%)
 Frame = +3

Query: 3   IAKNAGDNGNVVIERVLCSDNPKYGYNVATEKYEDLMTVGIIDPTKRLLLLIIWCCLDHA 182
           IAKNAG NG+VVIE+VL SDNPKYGYN AT KYEDLM  GIIDPTK     ++ CCL+HA
Sbjct: 519 IAKNAGVNGSVVIEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTK-----VVRCCLEHA 573

Query: 183 ASVARAFLTSDVVVV 227
           ASVAR FLTSD VVV
Sbjct: 574 ASVARTFLTSDAVVV 588


>gb|ABK24483.1| unknown [Picea sitchensis]
          Length = 617

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/75 (72%), Positives = 62/75 (82%)
 Frame = +3

Query: 3   IAKNAGDNGNVVIERVLCSDNPKYGYNVATEKYEDLMTVGIIDPTKRLLLLIIWCCLDHA 182
           IAKNAG NG+VV+E+VL SD+PKYGYN AT KYEDLM  GIIDPTK     ++ CCL+HA
Sbjct: 527 IAKNAGVNGSVVVEKVLSSDDPKYGYNAATGKYEDLMAAGIIDPTK-----VVRCCLEHA 581

Query: 183 ASVARAFLTSDVVVV 227
           ASVA+ FLTSDVVVV
Sbjct: 582 ASVAKTFLTSDVVVV 596


>ref|XP_003546771.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 591

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/75 (69%), Positives = 60/75 (80%)
 Frame = +3

Query: 3   IAKNAGDNGNVVIERVLCSDNPKYGYNVATEKYEDLMTVGIIDPTKRLLLLIIWCCLDHA 182
           IAKNAG NG+VV E+VL SDNP+YGYN AT KYEDLM+ GIIDPTK     ++ CCL+HA
Sbjct: 501 IAKNAGVNGSVVSEKVLSSDNPRYGYNAATGKYEDLMSAGIIDPTK-----VVRCCLEHA 555

Query: 183 ASVARAFLTSDVVVV 227
           ASVA+ FL SD VVV
Sbjct: 556 ASVAKTFLMSDCVVV 570


>ref|XP_003531529.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 592

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/75 (69%), Positives = 60/75 (80%)
 Frame = +3

Query: 3   IAKNAGDNGNVVIERVLCSDNPKYGYNVATEKYEDLMTVGIIDPTKRLLLLIIWCCLDHA 182
           IAKNAG NG+VV E+VL SDNP+YGYN AT KYEDLM+ GIIDPTK     ++ CCL+HA
Sbjct: 502 IAKNAGVNGSVVSEKVLSSDNPRYGYNAATGKYEDLMSAGIIDPTK-----VVRCCLEHA 556

Query: 183 ASVARAFLTSDVVVV 227
           ASVA+ FL SD VVV
Sbjct: 557 ASVAKTFLMSDCVVV 571


>sp|P08927.2|RUBB_PEA RecName: Full=RuBisCO large subunit-binding protein subunit beta,
           chloroplastic; AltName: Full=60 kDa chaperonin subunit
           beta; AltName: Full=CPN-60 beta; Flags: Precursor
           gi|806808|gb|AAA66365.1| chaperonin precursor [Pisum
           sativum]
          Length = 595

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/75 (69%), Positives = 59/75 (78%)
 Frame = +3

Query: 3   IAKNAGDNGNVVIERVLCSDNPKYGYNVATEKYEDLMTVGIIDPTKRLLLLIIWCCLDHA 182
           IAKNAG NG+VV E+VL SDNPKYGYN AT KYEDLM  GIIDPTK     ++ CCL+HA
Sbjct: 504 IAKNAGVNGSVVSEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTK-----VVRCCLEHA 558

Query: 183 ASVARAFLTSDVVVV 227
           +SVA+ FL SD VVV
Sbjct: 559 SSVAKTFLMSDCVVV 573