BLASTX nr result

ID: Coptis24_contig00030224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030224
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630258.1| Cysteine desulfurase [Medicago truncatula] g...    65   4e-09
ref|XP_002310507.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003630257.1| hypothetical protein MTR_8g093550 [Medicago ...    58   7e-07
ref|XP_002328318.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_003524304.1| PREDICTED: probable cysteine desulfurase-lik...    57   1e-06

>ref|XP_003630258.1| Cysteine desulfurase [Medicago truncatula]
           gi|355524280|gb|AET04734.1| Cysteine desulfurase
           [Medicago truncatula]
          Length = 645

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/69 (47%), Positives = 47/69 (68%)
 Frame = -2

Query: 207 ETHQQVVTTYDFNLGVVCFKMQKGGIDLQSELSIHEKCSWLQSQQIGNYIEFDTPFGKRR 28
           +T+ ++ T++DF      FK +   +DL    S+ EK  WL+SQ IGNY +FD+PFG+R+
Sbjct: 32  KTNNKLETSHDFCYHPESFK-KLVEMDLPCNESVEEKLCWLRSQIIGNYAKFDSPFGRRK 90

Query: 27  LTYADHTAS 1
           L YADHTAS
Sbjct: 91  LVYADHTAS 99


>ref|XP_002310507.1| predicted protein [Populus trichocarpa] gi|222853410|gb|EEE90957.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -2

Query: 102 EKCSWLQSQQIGNYIEFDTPFGKRRLTYADHTAS 1
           +K +WL+SQ +GN IEFD+PFGKRRLTYADHTAS
Sbjct: 1   KKLAWLRSQIVGNDIEFDSPFGKRRLTYADHTAS 34


>ref|XP_003630257.1| hypothetical protein MTR_8g093550 [Medicago truncatula]
           gi|355524279|gb|AET04733.1| hypothetical protein
           MTR_8g093550 [Medicago truncatula]
          Length = 635

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/45 (57%), Positives = 33/45 (73%)
 Frame = -2

Query: 135 GIDLQSELSIHEKCSWLQSQQIGNYIEFDTPFGKRRLTYADHTAS 1
           GI L    S+ EK  WL+SQ IGN +EF++PFG R+L Y+DHTAS
Sbjct: 55  GISLPCNESVEEKLCWLRSQIIGNDVEFNSPFGTRKLVYSDHTAS 99


>ref|XP_002328318.1| predicted protein [Populus trichocarpa] gi|222838033|gb|EEE76398.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -2

Query: 102 EKCSWLQSQQIGNYIEFDTPFGKRRLTYADHTAS 1
           +K +WL+SQ IG+ +EFD+PFGKRRLTYADHTAS
Sbjct: 1   KKLAWLRSQIIGDDVEFDSPFGKRRLTYADHTAS 34


>ref|XP_003524304.1| PREDICTED: probable cysteine desulfurase-like [Glycine max]
          Length = 609

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = -2

Query: 111 SIHEKCSWLQSQQIGNYIEFDTPFGKRRLTYADHTAS 1
           S+ EK  WL+SQ IGN  EFD+PFGKR++ YADHTAS
Sbjct: 47  SVEEKLHWLRSQIIGNDAEFDSPFGKRKVVYADHTAS 83


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