BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030185
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283177.1| PREDICTED: translation initiation factor eIF...    74   2e-11
emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]    74   2e-11
ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_004138220.1| PREDICTED: translation initiation factor eIF...    63   2e-08
ref|XP_002275165.2| PREDICTED: translation initiation factor eIF...    63   2e-08

>ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera]
          Length = 650

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 51/115 (44%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
 Frame = +1

Query: 4   RTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVEXXXXXXXXXXXXXXXXXXVMIPPP 183
           R  +R+VIDPK+RQVGFF          RT S P E                  VMIPPP
Sbjct: 4   RRGARVVIDPKVRQVGFFAPG---ASPGRTQSGPPESSSPPVADNSPTGNSLSPVMIPPP 60

Query: 184 RHVSDNITFKFP--MSPLRRLSSGDNVLHGSYNPSELFLSSGAGLSSESNKVGDG 342
           RH SDN+    P    PLRR   GD +  GSYNPSE F  +    S  S KVGDG
Sbjct: 61  RHASDNLLSARPALYPPLRR--PGDTIPVGSYNPSEFFHGTSPTASFYS-KVGDG 112


>emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]
          Length = 841

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 51/115 (44%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
 Frame = +1

Query: 4   RTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVEXXXXXXXXXXXXXXXXXXVMIPPP 183
           R  +R+VIDPK+RQVGFF          RT S P E                  VMIPPP
Sbjct: 69  RRGARVVIDPKVRQVGFFAPG---ASPGRTQSGPPESSSPPVADNSPTGNSLSPVMIPPP 125

Query: 184 RHVSDNITFKFP--MSPLRRLSSGDNVLHGSYNPSELFLSSGAGLSSESNKVGDG 342
           RH SDN+    P    PLRR   GD +  GSYNPSE F  +    S  S KVGDG
Sbjct: 126 RHASDNLLSARPALYPPLRR--PGDTIPVGSYNPSEFFHGTSPTASFYS-KVGDG 177


>ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|222859236|gb|EEE96783.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 49/124 (39%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
 Frame = +1

Query: 1   RRTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVEXXXXXXXXXXXXXXXXXXVMIPP 180
           RR T+ +   P++RQVGFFT N      +RT SFP                    VMIPP
Sbjct: 4   RRATTTV---PRVRQVGFFTPNAPPAQPSRTQSFP-RDSSSPPLSNSPASNSLSPVMIPP 59

Query: 181 PRHVSDNITFKFPMSPL---------RRLSSGDNVLHGSYNPSELFLSSGAGLSSESNKV 333
           PRH+SDN+  +   SPL         R + S    + GSYNPSE  L S   L+S S++V
Sbjct: 60  PRHLSDNLVHR-ATSPLPVPEPPAFRRPIRSHHVAVVGSYNPSESLLGSSPPLASPSSRV 118

Query: 334 -GDG 342
            GDG
Sbjct: 119 IGDG 122


>ref|XP_004138220.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Cucumis sativus] gi|449477114|ref|XP_004154933.1|
           PREDICTED: translation initiation factor eIF-2B subunit
           delta-like [Cucumis sativus]
          Length = 643

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
 Frame = +1

Query: 22  VIDPKIRQVGFFTSNEYQIPANRTHSFPVEXXXXXXXXXXXXXXXXXXVMIPPPRHVSDN 201
           V++PKIRQVGFFT +    P  R+ S P +                  VMIPPPRH+SDN
Sbjct: 9   VVNPKIRQVGFFTLDPPN-PPGRSLSGPADCTPSQQSLSPPSNSLSP-VMIPPPRHLSDN 66

Query: 202 ITFK---FPM-SPLRRLSSGDNVLHGSYNPSELFLSSGAGLSSESNKVGD 339
           +  +   FP+  P     S D++  GSYNPSE+ L+     +S S ++GD
Sbjct: 67  LASRSAVFPLPPPANWRDSADHIHVGSYNPSEMLLA-----TSPSGRIGD 111


>ref|XP_002275165.2| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera] gi|297734159|emb|CBI15406.3| unnamed
           protein product [Vitis vinifera]
          Length = 649

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 45/120 (37%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
 Frame = +1

Query: 4   RTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVE-XXXXXXXXXXXXXXXXXXVMIPP 180
           R TSR+ IDPK+RQVGFF     +   +R+ S P+                    VMIPP
Sbjct: 4   RRTSRIPIDPKVRQVGFFAPGALR---DRSQSGPLGFSSSPPVSNISPTGNSLSPVMIPP 60

Query: 181 PRHVSDNITFKFPM------SPLRRLSSGDNVLHGSYNPSELFLSSGAGLSSESNKVGDG 342
           PRH SDN     P+      S LR  +  D +  GSY+ SEL L + A     S+++GDG
Sbjct: 61  PRHASDNFVLSRPLAVPVSDSTLRPPAVEDRMAVGSYDASELLLGTSA-----SSRIGDG 115