BLASTX nr result

ID: Coptis24_contig00030116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030116
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
emb|CBI29073.3| unnamed protein product [Vitis vinifera]              107   8e-22
ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242...   107   1e-21
ref|XP_002275246.1| PREDICTED: uncharacterized protein LOC100241...   103   1e-20
ref|XP_003545205.1| PREDICTED: uncharacterized protein LOC100803...    97   1e-18

>ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|222875180|gb|EEF12311.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  108 bits (269), Expect = 6e-22
 Identities = 58/126 (46%), Positives = 80/126 (63%), Gaps = 7/126 (5%)
 Frame = -3

Query: 360 LDTSLNFNKSPTYQLFIKKQSFHYSRPCYGSKVGLSMENQC-------RKSRGSRRKAED 202
           +D  +++ K   +   +K Q F  SR    +KV  S   Q        R SR +R  A+ 
Sbjct: 14  VDIEISYKKQNPFLSSLKVQCFCSSRSSQNAKVSHSGSVQSLVTLHSTRVSRVARTDAQR 73

Query: 201 ALLDYLHNTRSIQFSDAEYISKNSPVFVGNLLTKVKNEQEIVKSLSRYFCYNPINEFEPF 22
            L DYLH TR+  F+DAE+ISKNSP F+ NLLTK+ N++++V+ L+++  YNPINEFEPF
Sbjct: 74  VLFDYLHCTRNFDFNDAEHISKNSPHFIENLLTKIDNDKDVVRLLNKFLRYNPINEFEPF 133

Query: 21  FESLGL 4
           FESLGL
Sbjct: 134 FESLGL 139


>emb|CBI29073.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/142 (45%), Positives = 86/142 (60%), Gaps = 6/142 (4%)
 Frame = -3

Query: 408 KMHSQLHYY------PIHSHVLLDTSLNFNKSPTYQLFIKKQSFHYSRPCYGSKVGLSME 247
           +M  QL++Y      P  +H L  T L              + FH  RP    K+  S+ 
Sbjct: 99  EMICQLNHYGVVLRKPTSAHTLSFTPLRI------------RYFHCCRPANYLKLESSIP 146

Query: 246 NQCRKSRGSRRKAEDALLDYLHNTRSIQFSDAEYISKNSPVFVGNLLTKVKNEQEIVKSL 67
            + R SR  R +A+D L DYLH TRS   +DAE++SKNSP F+  LL+KV+NEQ++ +SL
Sbjct: 147 GR-RVSRVVRTEAQDVLFDYLHCTRSFHLTDAEHMSKNSPHFLQKLLSKVENEQDVARSL 205

Query: 66  SRYFCYNPINEFEPFFESLGLS 1
           S++  YNPINEFEPFFESLGL+
Sbjct: 206 SKFLRYNPINEFEPFFESLGLA 227


>ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242606 [Vitis vinifera]
          Length = 564

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/99 (55%), Positives = 72/99 (72%)
 Frame = -3

Query: 297 FHYSRPCYGSKVGLSMENQCRKSRGSRRKAEDALLDYLHNTRSIQFSDAEYISKNSPVFV 118
           FH  RP    K+  S+  + R SR  R +A+D L DYLH TRS   +DAE++SKNSP F+
Sbjct: 31  FHCCRPANYLKLESSIPGR-RVSRVVRTEAQDVLFDYLHCTRSFHLTDAEHMSKNSPHFL 89

Query: 117 GNLLTKVKNEQEIVKSLSRYFCYNPINEFEPFFESLGLS 1
             LL+KV+NEQ++ +SLS++  YNPINEFEPFFESLGL+
Sbjct: 90  QKLLSKVENEQDVARSLSKFLRYNPINEFEPFFESLGLA 128


>ref|XP_002275246.1| PREDICTED: uncharacterized protein LOC100241837 [Vitis vinifera]
           gi|147864060|emb|CAN83222.1| hypothetical protein
           VITISV_031366 [Vitis vinifera]
           gi|297739852|emb|CBI30034.3| unnamed protein product
           [Vitis vinifera]
          Length = 589

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/101 (55%), Positives = 72/101 (71%)
 Frame = -3

Query: 303 QSFHYSRPCYGSKVGLSMENQCRKSRGSRRKAEDALLDYLHNTRSIQFSDAEYISKNSPV 124
           +S ++  P   S V    EN    SR +R +A+ ALL+YLH TRS+QF DAE +SKNSP 
Sbjct: 54  ESENFQSPVETSTV--DFENVGHISRTTRAQAQAALLEYLHCTRSLQFMDAENMSKNSPF 111

Query: 123 FVGNLLTKVKNEQEIVKSLSRYFCYNPINEFEPFFESLGLS 1
           F+  +L KVKNE EI KS++R+  Y+PINEFEPFFESLGL+
Sbjct: 112 FLEKILGKVKNEAEIGKSITRFLRYHPINEFEPFFESLGLT 152


>ref|XP_003545205.1| PREDICTED: uncharacterized protein LOC100803162 [Glycine max]
          Length = 564

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/85 (52%), Positives = 65/85 (76%)
 Frame = -3

Query: 258 LSMENQCRKSRGSRRKAEDALLDYLHNTRSIQFSDAEYISKNSPVFVGNLLTKVKNEQEI 79
           LS  +  R SR  R +A+ AL+DY+H+TR   FSDAEYIS+NSP F+ +L++ + ++ ++
Sbjct: 39  LSSRSPKRVSRLLRSEAQHALMDYMHSTRGYTFSDAEYISENSPRFIESLVSMIDDKDDV 98

Query: 78  VKSLSRYFCYNPINEFEPFFESLGL 4
           ++SL R+  YNPINEFEPFFESLG+
Sbjct: 99  LRSLERFLRYNPINEFEPFFESLGI 123


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