BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030044
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|2...   371   e-101
ref|XP_002516790.1| ribonucleoside-diphosphate reductase small c...   366   1e-99
ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reduct...   365   2e-99
emb|CBI26173.3| unnamed protein product [Vitis vinifera]              363   9e-99
ref|NP_189000.1| Ribonucleoside-diphosphate reductase small chai...   359   2e-97

>ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|222851646|gb|EEE89193.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  371 bits (953), Expect = e-101
 Identities = 177/198 (89%), Positives = 191/198 (96%)
 Frame = +3

Query: 3   EMYKKAQASFWTAEEVDLSQDVQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLK 182
           EMYKKA+ASFWTAEEVDLS+D+QQWE L+DSEKHFISHVLAFFAASDGIVLENLAARFL 
Sbjct: 42  EMYKKAEASFWTAEEVDLSRDMQQWEALSDSEKHFISHVLAFFAASDGIVLENLAARFLY 101

Query: 183 DVQVPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKDSLFNAVENIPCVARKAKWAL 362
           DVQ+PEARAFYGFQIAMENIHSEMYSLLLETYIKDS+EK  LFNA+ENIPCVA KAKWAL
Sbjct: 102 DVQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSREKHRLFNAIENIPCVAEKAKWAL 161

Query: 363 DWIQSSRTFAERIVAFSCVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 542
           DWIQSS  FAER+VAF+C+EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 162 DWIQSSMVFAERLVAFACIEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 221

Query: 543 ACLLYSLLRRQLNWQRVH 596
           ACLLYSLL+RQL+WQ+V+
Sbjct: 222 ACLLYSLLQRQLHWQKVY 239


>ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis] gi|223543878|gb|EEF45404.1|
           ribonucleoside-diphosphate reductase small chain,
           putative [Ricinus communis]
          Length = 342

 Score =  366 bits (940), Expect = 1e-99
 Identities = 176/197 (89%), Positives = 188/197 (95%)
 Frame = +3

Query: 3   EMYKKAQASFWTAEEVDLSQDVQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLK 182
           EMYKKA+ASFWTAEEVDLSQDVQQWE L+ SEKHFISHVLAFFAASDGIVLENLAARFL 
Sbjct: 42  EMYKKAEASFWTAEEVDLSQDVQQWETLSVSEKHFISHVLAFFAASDGIVLENLAARFLN 101

Query: 183 DVQVPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKDSLFNAVENIPCVARKAKWAL 362
           D+QVPEARAFYGFQIAMENIHSEMYSLLLETYIKDS+EK+ LFNA+E IPCVARKAKWAL
Sbjct: 102 DIQVPEARAFYGFQIAMENIHSEMYSLLLETYIKDSREKNRLFNAIETIPCVARKAKWAL 161

Query: 363 DWIQSSRTFAERIVAFSCVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 542
           DWI SS  +AER+VAF+CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 162 DWIHSSSLYAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 221

Query: 543 ACLLYSLLRRQLNWQRV 593
           ACLLYSLL++QL WQ+V
Sbjct: 222 ACLLYSLLQKQLQWQKV 238


>ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reductase small chain A
           [Vitis vinifera]
          Length = 340

 Score =  365 bits (938), Expect = 2e-99
 Identities = 175/198 (88%), Positives = 188/198 (94%)
 Frame = +3

Query: 3   EMYKKAQASFWTAEEVDLSQDVQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLK 182
           EMYKKA+ASFWTAEEVDLS DVQQWE L++SEKHFISHVLAFFAASDGIVLENLAARFL 
Sbjct: 41  EMYKKAEASFWTAEEVDLSHDVQQWESLSNSEKHFISHVLAFFAASDGIVLENLAARFLH 100

Query: 183 DVQVPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKDSLFNAVENIPCVARKAKWAL 362
           D+Q+PEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK  LFNA+E+I CVA KAKWAL
Sbjct: 101 DIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIESISCVAGKAKWAL 160

Query: 363 DWIQSSRTFAERIVAFSCVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 542
           DWIQSS  FAER++AF+CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 161 DWIQSSTLFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 220

Query: 543 ACLLYSLLRRQLNWQRVH 596
           ACLLYSLL++QL WQ+VH
Sbjct: 221 ACLLYSLLQKQLPWQKVH 238


>emb|CBI26173.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  363 bits (933), Expect = 9e-99
 Identities = 174/197 (88%), Positives = 187/197 (94%)
 Frame = +3

Query: 6   MYKKAQASFWTAEEVDLSQDVQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLKD 185
           MYKKA+ASFWTAEEVDLS DVQQWE L++SEKHFISHVLAFFAASDGIVLENLAARFL D
Sbjct: 1   MYKKAEASFWTAEEVDLSHDVQQWESLSNSEKHFISHVLAFFAASDGIVLENLAARFLHD 60

Query: 186 VQVPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKDSLFNAVENIPCVARKAKWALD 365
           +Q+PEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK  LFNA+E+I CVA KAKWALD
Sbjct: 61  IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIESISCVAGKAKWALD 120

Query: 366 WIQSSRTFAERIVAFSCVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 545
           WIQSS  FAER++AF+CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA
Sbjct: 121 WIQSSTLFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 180

Query: 546 CLLYSLLRRQLNWQRVH 596
           CLLYSLL++QL WQ+VH
Sbjct: 181 CLLYSLLQKQLPWQKVH 197


>ref|NP_189000.1| Ribonucleoside-diphosphate reductase small chain A [Arabidopsis
           thaliana] gi|27735240|sp|P50651.2|RIR2A_ARATH RecName:
           Full=Ribonucleoside-diphosphate reductase small chain A;
           AltName: Full=Ribonucleoside-diphosphate reductase R2A
           subunit; Short=AtRNR2; Short=Protein R2at; AltName:
           Full=Ribonucleotide reductase small subunit A
           gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7
           [Arabidopsis thaliana] gi|9294514|dbj|BAB02776.1|
           ribonucleotide reductase [Arabidopsis thaliana]
           gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7
           [Arabidopsis thaliana] gi|332643258|gb|AEE76779.1|
           Ribonucleoside-diphosphate reductase small chain A
           [Arabidopsis thaliana]
          Length = 341

 Score =  359 bits (922), Expect = 2e-97
 Identities = 172/198 (86%), Positives = 187/198 (94%)
 Frame = +3

Query: 3   EMYKKAQASFWTAEEVDLSQDVQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLK 182
           EMYKKA+ASFWTAEEVDLS DVQQWE LTDSEKHFISH+LAFFAASDGIVLENLAARFL 
Sbjct: 41  EMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFISHILAFFAASDGIVLENLAARFLN 100

Query: 183 DVQVPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKDSLFNAVENIPCVARKAKWAL 362
           DVQVPEARAFYGFQIAMENIHSEMYSLLLET+IKDSKEKD LFNA+E IPC+++KAKW L
Sbjct: 101 DVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSKEKDRLFNAIETIPCISKKAKWCL 160

Query: 363 DWIQSSRTFAERIVAFSCVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 542
           DWIQS  +FA R+VAF+CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 161 DWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 220

Query: 543 ACLLYSLLRRQLNWQRVH 596
           ACLLYSLL++QL  ++V+
Sbjct: 221 ACLLYSLLQKQLPLEKVY 238