BLASTX nr result

ID: Coptis24_contig00029966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029966
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263191.1| PREDICTED: uncharacterized protein LOC100261...    81   5e-25
emb|CBI23968.3| unnamed protein product [Vitis vinifera]               81   5e-25
ref|XP_002330640.1| predicted protein [Populus trichocarpa] gi|2...    81   3e-24
ref|XP_002305794.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-23
ref|XP_003545987.1| PREDICTED: uncharacterized protein LOC100797...    77   7e-23

>ref|XP_002263191.1| PREDICTED: uncharacterized protein LOC100261530 [Vitis vinifera]
          Length = 309

 Score = 80.9 bits (198), Expect(2) = 5e-25
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   EVFVGKAERLRTLIKIMCSAAKTCMREKKMHMGPWRKQKYMQAK 133
           EVFVGK ERL TL+KI+C AAK CM+EKKMHMGPWRK +YMQAK
Sbjct: 217 EVFVGKVERLHTLVKILCMAAKKCMKEKKMHMGPWRKHRYMQAK 260



 Score = 58.5 bits (140), Expect(2) = 5e-25
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = +3

Query: 210 TCKRTMPTTTFSEGLTSRLQRPKASLLTFDLLEKLPSLHCTAVEVL 347
           TC R+  T++   G + RL +PKAS+LT DL+EKLP++HCTAVEV+
Sbjct: 264 TCVRSTSTSSLLSGDSGRLPKPKASMLTVDLMEKLPNMHCTAVEVV 309


>emb|CBI23968.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score = 80.9 bits (198), Expect(2) = 5e-25
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   EVFVGKAERLRTLIKIMCSAAKTCMREKKMHMGPWRKQKYMQAK 133
           EVFVGK ERL TL+KI+C AAK CM+EKKMHMGPWRK +YMQAK
Sbjct: 183 EVFVGKVERLHTLVKILCMAAKKCMKEKKMHMGPWRKHRYMQAK 226



 Score = 58.5 bits (140), Expect(2) = 5e-25
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = +3

Query: 210 TCKRTMPTTTFSEGLTSRLQRPKASLLTFDLLEKLPSLHCTAVEVL 347
           TC R+  T++   G + RL +PKAS+LT DL+EKLP++HCTAVEV+
Sbjct: 230 TCVRSTSTSSLLSGDSGRLPKPKASMLTVDLMEKLPNMHCTAVEVV 275


>ref|XP_002330640.1| predicted protein [Populus trichocarpa] gi|222872244|gb|EEF09375.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score = 81.3 bits (199), Expect(2) = 3e-24
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = +2

Query: 2   EVFVGKAERLRTLIKIMCSAAKTCMREKKMHMGPWRKQKYMQAK 133
           EVFVGKAERL  LIKI+CSAAK CM+EKKMH+GPWRK KYMQ+K
Sbjct: 205 EVFVGKAERLTALIKILCSAAKKCMKEKKMHLGPWRKHKYMQSK 248



 Score = 55.5 bits (132), Expect(2) = 3e-24
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = +3

Query: 210 TCKRTMPTTTFSEGLTSRLQRPKASLLTFDLLEKLPSLHCTAVEVL 347
           TC+RT P      G + R  +P+AS+LT+DLLE LP LHCTAVEVL
Sbjct: 252 TCERTTPAP-LPGGFSDRTAKPRASMLTYDLLETLPVLHCTAVEVL 296


>ref|XP_002305794.1| predicted protein [Populus trichocarpa] gi|222848758|gb|EEE86305.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score = 78.6 bits (192), Expect(2) = 3e-23
 Identities = 33/44 (75%), Positives = 40/44 (90%)
 Frame = +2

Query: 2   EVFVGKAERLRTLIKIMCSAAKTCMREKKMHMGPWRKQKYMQAK 133
           EVFVGK ERL +++KI+C AAK CM+EKKMH+GPWRKQ+YMQAK
Sbjct: 213 EVFVGKVERLNSVVKILCLAAKKCMKEKKMHLGPWRKQRYMQAK 256



 Score = 54.7 bits (130), Expect(2) = 3e-23
 Identities = 26/46 (56%), Positives = 32/46 (69%)
 Frame = +3

Query: 210 TCKRTMPTTTFSEGLTSRLQRPKASLLTFDLLEKLPSLHCTAVEVL 347
           TC+R+     FS G + RL RPKAS+LT DL E LP +HCTAV V+
Sbjct: 261 TCERSTSMPPFSMGSSGRLPRPKASMLTVDLKEMLPDVHCTAVAVV 306


>ref|XP_003545987.1| PREDICTED: uncharacterized protein LOC100797510 [Glycine max]
          Length = 300

 Score = 77.4 bits (189), Expect(2) = 7e-23
 Identities = 34/44 (77%), Positives = 37/44 (84%)
 Frame = +2

Query: 2   EVFVGKAERLRTLIKIMCSAAKTCMREKKMHMGPWRKQKYMQAK 133
           EVFVGK ERL  LIKI+C  AK CM+EKKMHMGPWRK +YMQAK
Sbjct: 203 EVFVGKVERLSNLIKILCMGAKRCMKEKKMHMGPWRKHRYMQAK 246



 Score = 54.7 bits (130), Expect(2) = 7e-23
 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
 Frame = +3

Query: 207 GTCKRTMPTTTFSEGLTSRL-----QRPKASLLTFDLLEKLPSLHCTAVEVL 347
           G C+R   T + S G + R+      RPKAS+LT DLLEKLP++HC AVEV+
Sbjct: 249 GPCERNTSTASLSVGYSERILPMAKPRPKASMLTVDLLEKLPNMHCNAVEVV 300


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