BLASTX nr result

ID: Coptis24_contig00029888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029888
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281775.1| PREDICTED: uncharacterized protein LOC100242...   102   5e-20
emb|CAN78966.1| hypothetical protein VITISV_019939 [Vitis vinifera]   102   5e-20
ref|XP_002315573.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002528818.1| conserved hypothetical protein [Ricinus comm...    95   8e-18
ref|XP_002271998.1| PREDICTED: uncharacterized protein LOC100242...    93   4e-17

>ref|XP_002281775.1| PREDICTED: uncharacterized protein LOC100242675 [Vitis vinifera]
          Length = 153

 Score =  102 bits (254), Expect = 5e-20
 Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 7/105 (6%)
 Frame = -2

Query: 368 AKQLEELKSGVNNKLLAGYMATEFLGNGTFLGGKYDPARAEAAPV---SAKGRGVE---- 210
           A  L+  +   +N+LLAGYMA EFL  GT  G K DPARAEA P+   +A+G+ ++    
Sbjct: 43  AATLKAAEPASSNRLLAGYMAYEFLTKGTLFGQKLDPARAEAVPLPSSAAEGKRMKLSQI 102

Query: 209 KKGAEANKPSLKKHQSYAEVANLLKSDGTHIPGIFNPTHLARWLQ 75
           ++ AE +    K+HQSY E+A+LLK+DG HIPGI NPT LARW+Q
Sbjct: 103 EEAAEPSARPAKQHQSYGELASLLKTDGAHIPGIVNPTQLARWIQ 147


>emb|CAN78966.1| hypothetical protein VITISV_019939 [Vitis vinifera]
          Length = 153

 Score =  102 bits (254), Expect = 5e-20
 Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 7/105 (6%)
 Frame = -2

Query: 368 AKQLEELKSGVNNKLLAGYMATEFLGNGTFLGGKYDPARAEAAPV---SAKGRGVE---- 210
           A  L+  +   +N+LLAGYMA EFL  GT  G K DPARAEA P+   +A+G+ ++    
Sbjct: 43  AATLKAAEPASSNRLLAGYMAYEFLTKGTLFGQKLDPARAEAVPLPSSAAEGKRMKLSQI 102

Query: 209 KKGAEANKPSLKKHQSYAEVANLLKSDGTHIPGIFNPTHLARWLQ 75
           ++ AE +    K+HQSY E+A+LLK+DG HIPGI NPT LARW+Q
Sbjct: 103 EEAAEPSARPAKQHQSYGELASLLKTDGAHIPGIVNPTQLARWIQ 147


>ref|XP_002315573.1| predicted protein [Populus trichocarpa] gi|222864613|gb|EEF01744.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  100 bits (249), Expect = 2e-19
 Identities = 62/148 (41%), Positives = 78/148 (52%)
 Frame = -2

Query: 518 GMSRKRKEREIMGPKMDSKAGLKTGFDGFXXXXXXXXXXXXXXXXXXXXSAKQLEELKSG 339
           G S+KRKERE +   M  K+                              A  L+E  S 
Sbjct: 12  GASKKRKEREALSYSMKPKSA-------------------------SAQPASNLDEPIS- 45

Query: 338 VNNKLLAGYMATEFLGNGTFLGGKYDPARAEAAPVSAKGRGVEKKGAEANKPSLKKHQSY 159
            +N+LLAGYMA EFL  GT LG K+DPARAE   ++       K+G    K   K+H+SY
Sbjct: 46  -SNRLLAGYMAYEFLTEGTLLGQKFDPARAEVTSLAGGSVECSKRGEPGKK---KEHKSY 101

Query: 158 AEVANLLKSDGTHIPGIFNPTHLARWLQ 75
           AEVA++LK +G HIPGI NP  LARW+Q
Sbjct: 102 AEVASILKGEGAHIPGIVNPCQLARWIQ 129


>ref|XP_002528818.1| conserved hypothetical protein [Ricinus communis]
           gi|223531730|gb|EEF33552.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 142

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 3/90 (3%)
 Frame = -2

Query: 335 NNKLLAGYMATEFLGNGTFLGGKYDPARAEAAPVSAKGRGVEKKGAEANKPSL---KKHQ 165
           +NKLLAGYMA E+L  GT  G K+DP RAEA  + A G    K+G++A +      K+H+
Sbjct: 53  SNKLLAGYMAYEYLTKGTLFGQKFDPGRAEAVAL-AGGLVESKRGSKAIEMETRWKKEHK 111

Query: 164 SYAEVANLLKSDGTHIPGIFNPTHLARWLQ 75
           SYAEVA +LK++G H+PGI NPT LARW+Q
Sbjct: 112 SYAEVAGILKTEGAHLPGIVNPTQLARWIQ 141


>ref|XP_002271998.1| PREDICTED: uncharacterized protein LOC100242917 [Vitis vinifera]
          Length = 142

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 48/86 (55%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
 Frame = -2

Query: 332 NKLLAGYMATEFLGNGTFLGGKYDPARAEAAPVSAKGRGVEK-KGAEANKPSLKKHQSYA 156
           N+LLAGY+A EFL  GT LG K+DP RA+AAPV  + +  EK KG    +PS + +  Y 
Sbjct: 55  NQLLAGYLAHEFLTKGTLLGEKWDPDRADAAPVPVEFKRKEKGKGKGRAEPSAEAYNRYV 114

Query: 155 EVANLLKSDGTHIPGIFNPTHLARWL 78
           EVA+LLK DG H+PGI NPT L R+L
Sbjct: 115 EVADLLKRDGAHLPGIVNPTQLGRFL 140


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