BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029880
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892238.1| AAA-type ATPase family protein [Arabidopsis ...   117   1e-24
ref|XP_002518124.1| chromosome transmission fidelity factor, put...   117   1e-24
ref|XP_002299277.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
emb|CAN69746.1| hypothetical protein VITISV_016319 [Vitis vinifera]   116   2e-24
ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity ...   113   1e-23

>ref|XP_002892238.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338080|gb|EFH68497.1| AAA-type ATPase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 939

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 7/111 (6%)
 Frame = -2

Query: 417 FTELLSDEQTNREVLLWLKQWDSGVFGSDIRSTKDDVLSSLRRHSTVTHHKKLSDTSFTS 238
           FTELLSDEQTNREVLLWLKQWD+ VFGS+IRST ++VLS+L+RHST +HH+K SD++FT 
Sbjct: 243 FTELLSDEQTNREVLLWLKQWDASVFGSEIRSTTEEVLSALKRHSTSSHHQK-SDSAFTR 301

Query: 237 KNR-------RFPYPYKASVSNNLARESSNFESNHGIWKKTLKGAGPPDHK 106
           K +        F YP  A VSN      +N   N+ +W K  K  GPP+ K
Sbjct: 302 KKQFNRWSKESFRYPKNADVSN------TNTADNNDLWNKKSKLTGPPEQK 346


>ref|XP_002518124.1| chromosome transmission fidelity factor, putative [Ricinus
           communis] gi|223542720|gb|EEF44257.1| chromosome
           transmission fidelity factor, putative [Ricinus
           communis]
          Length = 813

 Score =  117 bits (292), Expect = 1e-24
 Identities = 60/105 (57%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
 Frame = -2

Query: 417 FTELLSDEQTNREVLLWLKQWDSGVFGSDIRSTKDDVLSSLRRHSTVTHHKKLSDTSFTS 238
           FTELLSDEQTNREVLLWLKQWDS VFGS+IRST DD+LSSLRRHSTV+ H+KLS ++F  
Sbjct: 224 FTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSDDILSSLRRHSTVSQHQKLSHSNFPR 283

Query: 237 KNRRFPYPY-KASVSNNLARESSNFESNHGIWKKTLKGAGPPDHK 106
           + +   +       SN+L  E+SN +    +W K  +  GPP+ K
Sbjct: 284 RIKGHGWTNGNFRHSNSLDNENSNVKGIQDLWSKKSRLTGPPEQK 328


>ref|XP_002299277.1| predicted protein [Populus trichocarpa] gi|222846535|gb|EEE84082.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/105 (57%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
 Frame = -2

Query: 417 FTELLSDEQTNREVLLWLKQWDSGVFGSDIRSTKDDVLSSLRRHSTVTHHKKLSDTSFTS 238
           FTELLSDEQTNREVLLW KQWDS VFGSDIRST DD+LS+LRRHS++  H K SD++F S
Sbjct: 227 FTELLSDEQTNREVLLWFKQWDSCVFGSDIRSTSDDILSALRRHSSIAQHPKPSDSTFFS 286

Query: 237 KNRRFPYPY-KASVSNNLARESSNFESNHGIWKKTLKGAGPPDHK 106
           KN+   +       SNNL +E+S  +     W K  +  GPP+ K
Sbjct: 287 KNKGNIWSRGNFRHSNNLEQENSKSKGFQDSWTKKSRPTGPPEQK 331


>emb|CAN69746.1| hypothetical protein VITISV_016319 [Vitis vinifera]
          Length = 214

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/105 (55%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
 Frame = -2

Query: 417 FTELLSDEQTNREVLLWLKQWDSGVFGSDIRSTKDDVLSSLRRHSTVTHHKKLSDTSFTS 238
           FTELLSDEQTNREVLLWLKQWDS VFGS+IRST ++VLS+LRRHS++  H++ S  SF  
Sbjct: 78  FTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTXEEVLSALRRHSSIAQHQRPSGMSFLR 137

Query: 237 KNR-RFPYPYKASVSNNLARESSNFESNHGIWKKTLKGAGPPDHK 106
           KN+ +      +  SNNL +E+ N +    +W K  +G GPP+ K
Sbjct: 138 KNKGQRLSDGNSRYSNNLDQENGNLKGLQELWNKKSRGTGPPEQK 182


>ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity protein 18 homolog
           [Vitis vinifera]
          Length = 948

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/105 (54%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
 Frame = -2

Query: 417 FTELLSDEQTNREVLLWLKQWDSGVFGSDIRSTKDDVLSSLRRHSTVTHHKKLSDTSFTS 238
           FTELLSDEQTNREVLLWLKQWDS VFGS+IRST ++VLS+LRRHS++  H++ S  S   
Sbjct: 215 FTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTTEEVLSALRRHSSIAQHQRPSGMSLHR 274

Query: 237 KNR-RFPYPYKASVSNNLARESSNFESNHGIWKKTLKGAGPPDHK 106
           KN+ +      +  SNNL +E+ N +    +W K  +G GPP+ K
Sbjct: 275 KNKGQRLSDGNSRYSNNLDQENGNLKGLQELWNKKSRGTGPPEQK 319