BLASTX nr result

ID: Coptis24_contig00029870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029870
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512379.1| conserved hypothetical protein [Ricinus comm...   177   1e-42
ref|XP_002284712.1| PREDICTED: uncharacterized protein LOC100264...   175   3e-42
ref|NP_568497.1| uncharacterized protein [Arabidopsis thaliana] ...   174   9e-42
ref|XP_002874364.1| hypothetical protein ARALYDRAFT_489571 [Arab...   173   1e-41
ref|XP_002319008.1| predicted protein [Populus trichocarpa] gi|1...   173   1e-41

>ref|XP_002512379.1| conserved hypothetical protein [Ricinus communis]
           gi|223548340|gb|EEF49831.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 343

 Score =  177 bits (448), Expect = 1e-42
 Identities = 88/100 (88%), Positives = 95/100 (95%)
 Frame = +1

Query: 82  SCLPSDLEGAVRQSSEAAATFVLSGGLRAIVELLIPQLQFLDDEGAQAELWGLSRIFLET 261
           SCLPSDLEGAVRQSSEA+A FV SGG++AIVELLIPQLQFLD+EGAQAELW LSRIFL+T
Sbjct: 89  SCLPSDLEGAVRQSSEASALFVSSGGMKAIVELLIPQLQFLDEEGAQAELWELSRIFLDT 148

Query: 262 LIKETGCQRVKAIFPDAGAAALLKYQWKDAAFGVASLSDR 381
           LI+ETGCQ+VKAIFPDAGAAALLKYQWKDA FG ASLSDR
Sbjct: 149 LIEETGCQKVKAIFPDAGAAALLKYQWKDATFGFASLSDR 188


>ref|XP_002284712.1| PREDICTED: uncharacterized protein LOC100264831 [Vitis vinifera]
           gi|296088326|emb|CBI36771.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  175 bits (444), Expect = 3e-42
 Identities = 87/100 (87%), Positives = 95/100 (95%)
 Frame = +1

Query: 82  SCLPSDLEGAVRQSSEAAATFVLSGGLRAIVELLIPQLQFLDDEGAQAELWGLSRIFLET 261
           SCLPSDLEGAVRQS +A+A+FV SGG+RAIVELLIPQLQFLDDEGAQAELW LSRIF++T
Sbjct: 100 SCLPSDLEGAVRQSGQASASFVSSGGMRAIVELLIPQLQFLDDEGAQAELWELSRIFIDT 159

Query: 262 LIKETGCQRVKAIFPDAGAAALLKYQWKDAAFGVASLSDR 381
           LI+ETGCQRVKAIFPDAGAAALLKY+W DAAFG ASLSDR
Sbjct: 160 LIEETGCQRVKAIFPDAGAAALLKYRWGDAAFGFASLSDR 199


>ref|NP_568497.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13877993|gb|AAK44074.1|AF370259_1 unknown protein
           [Arabidopsis thaliana] gi|17104721|gb|AAL34249.1|
           unknown protein [Arabidopsis thaliana]
           gi|332006318|gb|AED93701.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 341

 Score =  174 bits (440), Expect = 9e-42
 Identities = 86/99 (86%), Positives = 91/99 (91%)
 Frame = +1

Query: 85  CLPSDLEGAVRQSSEAAATFVLSGGLRAIVELLIPQLQFLDDEGAQAELWGLSRIFLETL 264
           CLP+DLEGAVRQS EA A FV SGG RAIVELLIPQLQFLDDEGAQAELW LSR+FLETL
Sbjct: 91  CLPNDLEGAVRQSGEAGAAFVNSGGNRAIVELLIPQLQFLDDEGAQAELWDLSRVFLETL 150

Query: 265 IKETGCQRVKAIFPDAGAAALLKYQWKDAAFGVASLSDR 381
           IKETGC+RVKA+FPDAGAAALLKY+WKDA FG ASLSDR
Sbjct: 151 IKETGCERVKAVFPDAGAAALLKYRWKDATFGFASLSDR 189


>ref|XP_002874364.1| hypothetical protein ARALYDRAFT_489571 [Arabidopsis lyrata subsp.
           lyrata] gi|297320201|gb|EFH50623.1| hypothetical protein
           ARALYDRAFT_489571 [Arabidopsis lyrata subsp. lyrata]
          Length = 340

 Score =  173 bits (439), Expect = 1e-41
 Identities = 85/99 (85%), Positives = 91/99 (91%)
 Frame = +1

Query: 85  CLPSDLEGAVRQSSEAAATFVLSGGLRAIVELLIPQLQFLDDEGAQAELWGLSRIFLETL 264
           CLP+DLEGAVRQS EA A FV SGG RAIVELLIPQLQFLDDEGAQAELW LSR+FL+TL
Sbjct: 90  CLPNDLEGAVRQSGEAGAAFVNSGGTRAIVELLIPQLQFLDDEGAQAELWDLSRVFLDTL 149

Query: 265 IKETGCQRVKAIFPDAGAAALLKYQWKDAAFGVASLSDR 381
           IKETGC+RVKA+FPDAGAAALLKY+WKDA FG ASLSDR
Sbjct: 150 IKETGCERVKAVFPDAGAAALLKYRWKDATFGFASLSDR 188


>ref|XP_002319008.1| predicted protein [Populus trichocarpa] gi|118487454|gb|ABK95555.1|
           unknown [Populus trichocarpa]
           gi|222857384|gb|EEE94931.1| predicted protein [Populus
           trichocarpa]
          Length = 339

 Score =  173 bits (438), Expect = 1e-41
 Identities = 87/100 (87%), Positives = 94/100 (94%)
 Frame = +1

Query: 82  SCLPSDLEGAVRQSSEAAATFVLSGGLRAIVELLIPQLQFLDDEGAQAELWGLSRIFLET 261
           SCLPSDLEGAVRQSS+A+A FV SGG+RAIVELLIPQLQFLDDEGAQAELW LSRIFL+T
Sbjct: 86  SCLPSDLEGAVRQSSQASALFVSSGGMRAIVELLIPQLQFLDDEGAQAELWELSRIFLDT 145

Query: 262 LIKETGCQRVKAIFPDAGAAALLKYQWKDAAFGVASLSDR 381
           LI+ETG QR+KAIFPDAGAAALLKY WKDAAFG +SLSDR
Sbjct: 146 LIEETGSQRIKAIFPDAGAAALLKYLWKDAAFGFSSLSDR 185


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