BLASTX nr result

ID: Coptis24_contig00029694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029694
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28115.3| unnamed protein product [Vitis vinifera]              343   3e-92
ref|XP_002281524.1| PREDICTED: uncharacterized protein LOC100245...   343   3e-92
ref|XP_002324965.1| predicted protein [Populus trichocarpa] gi|2...   315   6e-84
ref|XP_004168200.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   301   9e-80
ref|XP_004149859.1| PREDICTED: uncharacterized protein LOC101211...   301   9e-80

>emb|CBI28115.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  343 bits (880), Expect = 3e-92
 Identities = 190/283 (67%), Positives = 213/283 (75%), Gaps = 8/283 (2%)
 Frame = +2

Query: 8   MASLTPGILLKLLQSMNSDTKVAGEHRSVLLQIIGIVPALAGRELWPNHGFYVQLFDSSN 187
           MASLTPGILLKLLQSMNS+TKVAGEHRS LLQ+IGIVPALAG +LWPNHGFYVQL DS N
Sbjct: 1   MASLTPGILLKLLQSMNSNTKVAGEHRSALLQVIGIVPALAGSDLWPNHGFYVQLSDSLN 60

Query: 188 STYVSLSDRDNDLILTNRLQLGQFAYVDRLDFDSPVPRVSGIRPVAGRHPFVGSPDPLIA 367
           STYVSLSDRD DLILTNRLQLGQF YVDR DFDSPVPRV GIRP+AGRHPFVGSP+PLIA
Sbjct: 61  STYVSLSDRDTDLILTNRLQLGQFVYVDRFDFDSPVPRVCGIRPIAGRHPFVGSPEPLIA 120

Query: 368 RISPSKRGFVIQPVSDNSDPSLDPIAAYITGNK----KNQ-QQVKDDPRVDKERIRPALA 532
           RISPSK+ FVIQPVSD  D S+DPIAAY++  K    KN  ++ K + + +K R R  L 
Sbjct: 121 RISPSKKDFVIQPVSD-WDQSVDPIAAYLSNKKIDDVKNDGKESKIETKGEKGRTRQVLG 179

Query: 533 SKDN---VPVERKPDKPKRFSSPASAKQPRSISVGRKNVAVVEIEXXXXXXXXXXXXXXX 703
           ++DN   +   +  D+P+RFSSPA AK  RS+S G+KNVAV E                 
Sbjct: 180 TRDNNGDLDETKVSDRPQRFSSPAGAK--RSVSAGKKNVAVAE-RDPSPAGKGKRSASPV 236

Query: 704 XXXXXXXXXXTAKEENRKTSREPAIIVPSRYRQPSPNGRKQAS 832
                      A+EENRKTSREPAIIVPSRYRQPSPNGRKQAS
Sbjct: 237 PSKCMVPSLVVAREENRKTSREPAIIVPSRYRQPSPNGRKQAS 279


>ref|XP_002281524.1| PREDICTED: uncharacterized protein LOC100245597 [Vitis vinifera]
          Length = 710

 Score =  343 bits (880), Expect = 3e-92
 Identities = 190/283 (67%), Positives = 213/283 (75%), Gaps = 8/283 (2%)
 Frame = +2

Query: 8   MASLTPGILLKLLQSMNSDTKVAGEHRSVLLQIIGIVPALAGRELWPNHGFYVQLFDSSN 187
           MASLTPGILLKLLQSMNS+TKVAGEHRS LLQ+IGIVPALAG +LWPNHGFYVQL DS N
Sbjct: 1   MASLTPGILLKLLQSMNSNTKVAGEHRSALLQVIGIVPALAGSDLWPNHGFYVQLSDSLN 60

Query: 188 STYVSLSDRDNDLILTNRLQLGQFAYVDRLDFDSPVPRVSGIRPVAGRHPFVGSPDPLIA 367
           STYVSLSDRD DLILTNRLQLGQF YVDR DFDSPVPRV GIRP+AGRHPFVGSP+PLIA
Sbjct: 61  STYVSLSDRDTDLILTNRLQLGQFVYVDRFDFDSPVPRVCGIRPIAGRHPFVGSPEPLIA 120

Query: 368 RISPSKRGFVIQPVSDNSDPSLDPIAAYITGNK----KNQ-QQVKDDPRVDKERIRPALA 532
           RISPSK+ FVIQPVSD  D S+DPIAAY++  K    KN  ++ K + + +K R R  L 
Sbjct: 121 RISPSKKDFVIQPVSD-WDQSVDPIAAYLSNKKIDDVKNDGKESKIETKGEKGRTRQVLG 179

Query: 533 SKDN---VPVERKPDKPKRFSSPASAKQPRSISVGRKNVAVVEIEXXXXXXXXXXXXXXX 703
           ++DN   +   +  D+P+RFSSPA AK  RS+S G+KNVAV E                 
Sbjct: 180 TRDNNGDLDETKVSDRPQRFSSPAGAK--RSVSAGKKNVAVAE-RDPSPAGKGKRSASPV 236

Query: 704 XXXXXXXXXXTAKEENRKTSREPAIIVPSRYRQPSPNGRKQAS 832
                      A+EENRKTSREPAIIVPSRYRQPSPNGRKQAS
Sbjct: 237 PSKCMVPSLVVAREENRKTSREPAIIVPSRYRQPSPNGRKQAS 279


>ref|XP_002324965.1| predicted protein [Populus trichocarpa] gi|222866399|gb|EEF03530.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score =  315 bits (808), Expect = 6e-84
 Identities = 178/292 (60%), Positives = 205/292 (70%), Gaps = 17/292 (5%)
 Frame = +2

Query: 8   MASLTPGILLKLLQSMNSDTKVAGEHRSVLLQIIGIVPALAGRELWPNHGFYVQLFDSSN 187
           MASL PGILLKLLQSMNS  +V G+HRS LLQ+IGIVPALAG +LWPN GFYVQL DS N
Sbjct: 1   MASLAPGILLKLLQSMNSAARVTGDHRSPLLQVIGIVPALAGSDLWPNQGFYVQLSDSLN 60

Query: 188 STYVSLSDRDNDLILTNRLQLGQFAYVDRLDFDSPVPRVSGIRPVAGRHPFVGSPDPLIA 367
           STYVSLS+RD DLILTNRLQLGQF Y+DR DFDSPVPRVSGIRP+AGRH FVG+P+PLIA
Sbjct: 61  STYVSLSERDTDLILTNRLQLGQFVYIDRFDFDSPVPRVSGIRPIAGRHSFVGTPEPLIA 120

Query: 368 RISPSKRGFVIQPVSDNSDPSLDPIAAYITGNKKNQQQVKDD----PRVDKERIRPALAS 535
           RIS SK+ FVIQPV+D S+ S+DPIA Y++ NKK  +  ++D      V  +  R ALA 
Sbjct: 121 RISASKKEFVIQPVAD-SEYSVDPIAVYLSNNKKFDEFPRNDHNKKGEVTAKVTRQALAP 179

Query: 536 KDNVPVER--------KPDKPKRFSSPASAK-----QPRSISVGRKNVAVVEIEXXXXXX 676
           +DNV V+          P   KRFSSPA+AK       RS+SVG+KN A+VE        
Sbjct: 180 RDNVMVDETATAKRFSSPATAKRFSSPATAKIFFATAKRSVSVGKKNAALVE-RDPSPAA 238

Query: 677 XXXXXXXXXXXXXXXXXXXTAKEENRKTSREPAIIVPSRYRQPSPNGRKQAS 832
                               AKEENRK +REPAIIVPSRYRQPSP+GRKQ S
Sbjct: 239 KGKRSASPVPSKCMVPSLLAAKEENRKVAREPAIIVPSRYRQPSPSGRKQPS 290


>ref|XP_004168200.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226555 [Cucumis sativus]
          Length = 695

 Score =  301 bits (772), Expect = 9e-80
 Identities = 169/286 (59%), Positives = 200/286 (69%), Gaps = 11/286 (3%)
 Frame = +2

Query: 8   MASLTPGILLKLLQSMNSDTKVAGEHRSVLLQIIGIVPALAGRELWPNHGFYVQLFDSSN 187
           MASLTPGILLKLLQ+MNS+T+V G+HRS LLQ+IGIVPALAG ELWPN GFY+QL DS N
Sbjct: 1   MASLTPGILLKLLQAMNSNTRVTGDHRSALLQVIGIVPALAGSELWPNRGFYIQLSDSLN 60

Query: 188 STYVSLSDRDNDLILTNRLQLGQFAYVDRLDFDSPVPRVSGIRPVAGRHPFVGSPDPLIA 367
           STYVSLS+R+ DLIL+NRL LGQF YVDR +FD+P+PRV GIRP+ GR   VGSP+ LIA
Sbjct: 61  STYVSLSERETDLILSNRLHLGQFIYVDRFEFDTPIPRVCGIRPIPGRQASVGSPELLIA 120

Query: 368 RISPSKRGFVIQPVSDNSDPSLDPIAAYITGNKKNQQQVKDDP---RVDKERIRPALASK 538
           RIS SKR FVIQPV++ SD S DPIAA  +  K  + Q+K+     +    R R ALA +
Sbjct: 121 RISASKREFVIQPVTE-SDQSADPIAALSSNQKLEEPQIKESKSNLKTGSGRGRQALAPR 179

Query: 539 DNVPVERK--------PDKPKRFSSPASAKQPRSISVGRKNVAVVEIEXXXXXXXXXXXX 694
           DN+ +E K        P KP+RFSSPA  K  RS+SVG+KNV VVE              
Sbjct: 180 DNLQIENKGSTDETKVPHKPQRFSSPAGGK--RSMSVGKKNVPVVE-RDPSPAGKGKRSA 236

Query: 695 XXXXXXXXXXXXXTAKEENRKTSREPAIIVPSRYRQPSPNGRKQAS 832
                         A+EENR +S+E AIIVPSRYRQPSPNGR+QAS
Sbjct: 237 SPVPSKTVVPSLVAAREENRVSSKEAAIIVPSRYRQPSPNGRRQAS 282


>ref|XP_004149859.1| PREDICTED: uncharacterized protein LOC101211203 [Cucumis sativus]
          Length = 695

 Score =  301 bits (772), Expect = 9e-80
 Identities = 169/286 (59%), Positives = 200/286 (69%), Gaps = 11/286 (3%)
 Frame = +2

Query: 8   MASLTPGILLKLLQSMNSDTKVAGEHRSVLLQIIGIVPALAGRELWPNHGFYVQLFDSSN 187
           MASLTPGILLKLLQ+MNS+T+V G+HRS LLQ+IGIVPALAG ELWPN GFY+QL DS N
Sbjct: 1   MASLTPGILLKLLQAMNSNTRVTGDHRSALLQVIGIVPALAGSELWPNRGFYIQLSDSLN 60

Query: 188 STYVSLSDRDNDLILTNRLQLGQFAYVDRLDFDSPVPRVSGIRPVAGRHPFVGSPDPLIA 367
           STYVSLS+R+ DLIL+NRL LGQF YVDR +FD+P+PRV GIRP+ GR   VGSP+ LIA
Sbjct: 61  STYVSLSERETDLILSNRLHLGQFIYVDRFEFDTPIPRVCGIRPIPGRQASVGSPELLIA 120

Query: 368 RISPSKRGFVIQPVSDNSDPSLDPIAAYITGNKKNQQQVKDDP---RVDKERIRPALASK 538
           RIS SKR FVIQPV++ SD S DPIAA  +  K  + Q+K+     +    R R ALA +
Sbjct: 121 RISASKREFVIQPVTE-SDQSADPIAALSSNQKLEEPQIKESKSNLKTGSGRGRQALAPR 179

Query: 539 DNVPVERK--------PDKPKRFSSPASAKQPRSISVGRKNVAVVEIEXXXXXXXXXXXX 694
           DN+ +E K        P KP+RFSSPA  K  RS+SVG+KNV VVE              
Sbjct: 180 DNLQIENKGSTDETKVPHKPQRFSSPAGGK--RSMSVGKKNVPVVE-RDPSPAGKGKRSA 236

Query: 695 XXXXXXXXXXXXXTAKEENRKTSREPAIIVPSRYRQPSPNGRKQAS 832
                         A+EENR +S+E AIIVPSRYRQPSPNGR+QAS
Sbjct: 237 SPVPSKTVVPSLVAAREENRVSSKEAAIIVPSRYRQPSPNGRRQAS 282


Top