BLASTX nr result

ID: Coptis24_contig00029677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029677
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]   130   1e-28
ref|XP_002331306.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002331326.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002331325.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002331324.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28

>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
          Length = 1904

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/83 (74%), Positives = 70/83 (84%)
 Frame = -3

Query: 264  SYGSVYKGILHHGEGFIAVKVFDLMRQGASKSFMAECEALRGVRHRNLLKILTVCSSVDS 85
            S GSVYKGILH  E   AVKVF+L  +GASKSFMAECEALR +RHRNL+KI+T CSSVD 
Sbjct: 1658 SLGSVYKGILHPNETVXAVKVFNLQNRGASKSFMAECEALRNIRHRNLVKIITACSSVDF 1717

Query: 84   NGNDFKALVLKFMPNGSLESWLH 16
             GNDFKALV ++MPNGSLE+WLH
Sbjct: 1718 XGNDFKALVYEYMPNGSLETWLH 1740



 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/84 (69%), Positives = 67/84 (79%)
 Frame = -3

Query: 267  GSYGSVYKGILHHGEGFIAVKVFDLMRQGASKSFMAECEALRGVRHRNLLKILTVCSSVD 88
            G +GSVYKG L   E  +AVKV  L ++GA KSF AECEALR +RHRNL+K+LT CSSVD
Sbjct: 753  GGFGSVYKGXLGQDETVVAVKVIQLHQRGAVKSFKAECEALRNIRHRNLVKVLTTCSSVD 812

Query: 87   SNGNDFKALVLKFMPNGSLESWLH 16
              GNDFKALV +FMPNGSLE+WLH
Sbjct: 813  YQGNDFKALVYEFMPNGSLENWLH 836


>ref|XP_002331306.1| predicted protein [Populus trichocarpa] gi|222873889|gb|EEF11020.1|
           predicted protein [Populus trichocarpa]
          Length = 1021

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/89 (67%), Positives = 73/89 (82%)
 Frame = -3

Query: 267 GSYGSVYKGILHHGEGFIAVKVFDLMRQGASKSFMAECEALRGVRHRNLLKILTVCSSVD 88
           GS+GSVYKG+L      IAVKV +LMRQGAS+SF+AECEALR +RHRNL+K+LT CSS+D
Sbjct: 708 GSFGSVYKGMLDQNGMVIAVKVLNLMRQGASRSFIAECEALRNIRHRNLVKVLTACSSID 767

Query: 87  SNGNDFKALVLKFMPNGSLESWLHTSSNG 1
            +GNDFKA+V +FM NGSLE WLH +  G
Sbjct: 768 YHGNDFKAIVYEFMANGSLEDWLHPTGTG 796


>ref|XP_002331326.1| predicted protein [Populus trichocarpa] gi|222873909|gb|EEF11040.1|
           predicted protein [Populus trichocarpa]
          Length = 919

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/86 (72%), Positives = 71/86 (82%)
 Frame = -3

Query: 267 GSYGSVYKGILHHGEGFIAVKVFDLMRQGASKSFMAECEALRGVRHRNLLKILTVCSSVD 88
           GS+GSVYKGIL H    +AVKV +L RQGASKSFMAECEAL  VRHRNL+K++T CS VD
Sbjct: 625 GSFGSVYKGILDHNGTAVAVKVLNLTRQGASKSFMAECEALPNVRHRNLVKVVTACSGVD 684

Query: 87  SNGNDFKALVLKFMPNGSLESWLHTS 10
            +GNDFKALV +FM NGSLE+WLH S
Sbjct: 685 YHGNDFKALVYEFMVNGSLETWLHPS 710


>ref|XP_002331325.1| predicted protein [Populus trichocarpa] gi|222873908|gb|EEF11039.1|
           predicted protein [Populus trichocarpa]
          Length = 1007

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/86 (72%), Positives = 71/86 (82%)
 Frame = -3

Query: 267 GSYGSVYKGILHHGEGFIAVKVFDLMRQGASKSFMAECEALRGVRHRNLLKILTVCSSVD 88
           GS+GSVYKGIL H    +AVKV +L RQGASKSFMAECEAL  VRHRNL+K++T CS VD
Sbjct: 713 GSFGSVYKGILDHNGTAVAVKVLNLRRQGASKSFMAECEALPNVRHRNLVKVVTACSGVD 772

Query: 87  SNGNDFKALVLKFMPNGSLESWLHTS 10
            +GNDFKALV +FM NGSLE+WLH S
Sbjct: 773 YHGNDFKALVYEFMVNGSLETWLHPS 798


>ref|XP_002331324.1| predicted protein [Populus trichocarpa] gi|222873907|gb|EEF11038.1|
           predicted protein [Populus trichocarpa]
          Length = 768

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/86 (72%), Positives = 71/86 (82%)
 Frame = -3

Query: 267 GSYGSVYKGILHHGEGFIAVKVFDLMRQGASKSFMAECEALRGVRHRNLLKILTVCSSVD 88
           GS+GSVYKG L H    +AVKV +L RQGASKSFMAECEALR VRHRNL+K++T CS VD
Sbjct: 474 GSFGSVYKGTLDHNGIAVAVKVLNLTRQGASKSFMAECEALRNVRHRNLVKVVTACSGVD 533

Query: 87  SNGNDFKALVLKFMPNGSLESWLHTS 10
            +GNDFKALV +FM NGSLE+WLH S
Sbjct: 534 YHGNDFKALVYEFMVNGSLETWLHPS 559


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