BLASTX nr result

ID: Coptis24_contig00029662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029662
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314493.1| predicted protein [Populus trichocarpa] gi|2...   247   8e-64
ref|XP_002281958.1| PREDICTED: uncharacterized protein LOC100249...   246   1e-63
ref|XP_002311690.1| predicted protein [Populus trichocarpa] gi|2...   244   5e-63
ref|XP_002281923.2| PREDICTED: uncharacterized protein LOC100242...   243   1e-62
gb|ABG37642.1| cyclopropane fatty acid synthase [Populus trichoc...   241   6e-62

>ref|XP_002314493.1| predicted protein [Populus trichocarpa] gi|222863533|gb|EEF00664.1|
           predicted protein [Populus trichocarpa]
          Length = 866

 Score =  247 bits (630), Expect = 8e-64
 Identities = 114/156 (73%), Positives = 134/156 (85%)
 Frame = +3

Query: 3   SVTEKGARIFVTKFLERFITTGHLTLLEDGGTIFSFQGDNMKCRLEAVLRVHNPQFYWKV 182
           S+ E GAR+FVT+FL   I+TG LTLLEDGGT+FSF+G + KC L+ VL+VHNPQFYWK+
Sbjct: 434 SMLETGARLFVTRFLGHHISTGCLTLLEDGGTVFSFEGTSKKCSLKTVLKVHNPQFYWKI 493

Query: 183 ATHADLGIADAYVNGDFSFVDKEEGLLNLFLIFIANRDMKISVGKQNNKRGWWTPLFFTA 362
            T ADLG+ADAY+NGDFSFVDK+EGL+NLF+I I NRD   S  K N KRGWWTPL FTA
Sbjct: 494 MTQADLGLADAYINGDFSFVDKDEGLINLFMILIVNRDADNSTSKLNKKRGWWTPLLFTA 553

Query: 363 GIASAKYFLKHISRQNTLTQARRNISRHYDLSNDLF 470
           GIASAK+F++H+SRQNTLTQARRNISRHYDLSN+LF
Sbjct: 554 GIASAKFFIQHVSRQNTLTQARRNISRHYDLSNELF 589


>ref|XP_002281958.1| PREDICTED: uncharacterized protein LOC100249441 [Vitis vinifera]
          Length = 865

 Score =  246 bits (629), Expect = 1e-63
 Identities = 112/156 (71%), Positives = 136/156 (87%)
 Frame = +3

Query: 3   SVTEKGARIFVTKFLERFITTGHLTLLEDGGTIFSFQGDNMKCRLEAVLRVHNPQFYWKV 182
           S+ E GAR+FVT+FL  +I+TG L LLE+GGTI++F+G   KC L+  L++HNPQFYWK+
Sbjct: 433 SLLETGARLFVTRFLGHYISTGCLILLEEGGTIYTFEGSRKKCLLKVSLKIHNPQFYWKI 492

Query: 183 ATHADLGIADAYVNGDFSFVDKEEGLLNLFLIFIANRDMKISVGKQNNKRGWWTPLFFTA 362
           AT ADLG+ADAY+NGDFS VDK+EGL NLF+IFIANRD+  S+ + NNKRGWWTPLFFTA
Sbjct: 493 ATQADLGLADAYINGDFSLVDKDEGLQNLFMIFIANRDLDSSLSRLNNKRGWWTPLFFTA 552

Query: 363 GIASAKYFLKHISRQNTLTQARRNISRHYDLSNDLF 470
           GIASA+YF +H+SRQNTLTQARRNISRHYDLSN+LF
Sbjct: 553 GIASARYFFQHVSRQNTLTQARRNISRHYDLSNELF 588


>ref|XP_002311690.1| predicted protein [Populus trichocarpa] gi|222851510|gb|EEE89057.1|
           predicted protein [Populus trichocarpa]
          Length = 862

 Score =  244 bits (623), Expect = 5e-63
 Identities = 113/156 (72%), Positives = 134/156 (85%)
 Frame = +3

Query: 3   SVTEKGARIFVTKFLERFITTGHLTLLEDGGTIFSFQGDNMKCRLEAVLRVHNPQFYWKV 182
           S+ E GAR+FVT+FL  +I+TG L LLE+GGT+FSF+G + KC L+ VL+VHNPQFYWK+
Sbjct: 430 SMLETGARLFVTRFLGHYISTGCLILLEEGGTVFSFEGTSKKCSLKTVLKVHNPQFYWKI 489

Query: 183 ATHADLGIADAYVNGDFSFVDKEEGLLNLFLIFIANRDMKISVGKQNNKRGWWTPLFFTA 362
            T ADLG+ADAY+NGDFSFV+K+EGLLNLF+I I NRD   S  K N KRGWWTPL FTA
Sbjct: 490 MTQADLGLADAYINGDFSFVNKDEGLLNLFMILIVNRDANKSASKLNKKRGWWTPLLFTA 549

Query: 363 GIASAKYFLKHISRQNTLTQARRNISRHYDLSNDLF 470
           GIASAK+F++HISRQNTLTQARRNISRHYDLSN+LF
Sbjct: 550 GIASAKFFIQHISRQNTLTQARRNISRHYDLSNELF 585


>ref|XP_002281923.2| PREDICTED: uncharacterized protein LOC100242555 [Vitis vinifera]
          Length = 865

 Score =  243 bits (620), Expect = 1e-62
 Identities = 110/156 (70%), Positives = 135/156 (86%)
 Frame = +3

Query: 3   SVTEKGARIFVTKFLERFITTGHLTLLEDGGTIFSFQGDNMKCRLEAVLRVHNPQFYWKV 182
           S+ E GAR+FVT+FL  +I+TG L LLE+GGTI++F+G   KC L+  L++HNPQFYWKV
Sbjct: 433 SLLETGARLFVTRFLGHYISTGCLILLEEGGTIYTFEGSGKKCLLKVALKIHNPQFYWKV 492

Query: 183 ATHADLGIADAYVNGDFSFVDKEEGLLNLFLIFIANRDMKISVGKQNNKRGWWTPLFFTA 362
           AT ADLG+ADAY+NGDFS VDK+EGL +LF+IFIANRD+  S+ + N KRGWWTPLFFTA
Sbjct: 493 ATQADLGLADAYINGDFSLVDKDEGLQSLFMIFIANRDLDSSLSRLNKKRGWWTPLFFTA 552

Query: 363 GIASAKYFLKHISRQNTLTQARRNISRHYDLSNDLF 470
           GIASAKY+ +H+SRQNTLTQARRN+SRHYDLSN+LF
Sbjct: 553 GIASAKYYFQHVSRQNTLTQARRNVSRHYDLSNELF 588


>gb|ABG37642.1| cyclopropane fatty acid synthase [Populus trichocarpa]
          Length = 1664

 Score =  241 bits (614), Expect = 6e-62
 Identities = 111/154 (72%), Positives = 130/154 (84%)
 Frame = +3

Query: 3   SVTEKGARIFVTKFLERFITTGHLTLLEDGGTIFSFQGDNMKCRLEAVLRVHNPQFYWKV 182
           S+ E GAR+FVT+FL   I+TG LTLLEDGGT+FSF+G + KC L+ VL+VHNPQFYWK+
Sbjct: 371 SMLETGARLFVTRFLGHHISTGCLTLLEDGGTVFSFEGTSKKCSLKTVLKVHNPQFYWKI 430

Query: 183 ATHADLGIADAYVNGDFSFVDKEEGLLNLFLIFIANRDMKISVGKQNNKRGWWTPLFFTA 362
            T ADLG+ADAY+NGDFSFVDK+EGL+NLF+I I NRD   S  K N KRGWWTPL FTA
Sbjct: 431 MTQADLGLADAYINGDFSFVDKDEGLINLFMILIVNRDADNSTSKLNKKRGWWTPLLFTA 490

Query: 363 GIASAKYFLKHISRQNTLTQARRNISRHYDLSND 464
           GIASAK+F++H+SRQNTLTQARRNISRHYDL  D
Sbjct: 491 GIASAKFFIQHVSRQNTLTQARRNISRHYDLKED 524



 Score =  153 bits (387), Expect = 1e-35
 Identities = 81/163 (49%), Positives = 107/163 (65%), Gaps = 15/163 (9%)
 Frame = +3

Query: 12   EKGARIFVTKFLERFITTGHLTLLEDGGTIFSFQGDNMKCRLEAVLRVHNPQFYWKVATH 191
            E  AR+FVTKFL R I+T  L L E+GG  F+F+G + KC LE VL+VHNPQFYWKV T 
Sbjct: 902  EAWARLFVTKFLGRHISTHRLILEEEGGATFTFEGTSKKCSLEVVLKVHNPQFYWKVTTR 961

Query: 192  ADLGIADAYVNGDFSFVDKEEGLLNLFL----IFIANRDMKI----------SVGKQNNK 329
            AD+G+ADAY++GDFSF DK++GLL+L +    I++   + K+           +G  N  
Sbjct: 962  ADIGLADAYIDGDFSFADKDQGLLHLIMRCKQIYLPGEEEKVCDFASFYSFDPIGPSN-- 1019

Query: 330  RGWWTPLFFTAGIAS-AKYFLKHISRQNTLTQARRNISRHYDL 455
                  L+ + G+    +Y  +H+ RQNTLTQARRNISRHYDL
Sbjct: 1020 ----IHLWLSIGVGGHHRYLQQHVLRQNTLTQARRNISRHYDL 1058


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