BLASTX nr result

ID: Coptis24_contig00029502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029502
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155432.1| PREDICTED: rab GDP dissociation inhibitor al...   318   1e-84
ref|XP_004137066.1| PREDICTED: rab GDP dissociation inhibitor al...   318   1e-84
ref|XP_002268877.1| PREDICTED: rab GDP dissociation inhibitor al...   315   1e-83
emb|CAN64340.1| hypothetical protein VITISV_031564 [Vitis vinifera]   315   1e-83
ref|XP_002533685.1| protein with unknown function [Ricinus commu...   312   1e-82

>ref|XP_004155432.1| PREDICTED: rab GDP dissociation inhibitor alpha-like [Cucumis
           sativus]
          Length = 445

 Score =  318 bits (816), Expect = 1e-84
 Identities = 150/172 (87%), Positives = 161/172 (93%)
 Frame = +3

Query: 177 KVEFDANGKAFGVTSEGETAKCKKVVCDPSYLPDKVKKVGKVARAICIMSHPIPETSESH 356
           KVEF  +GKA+GVTSEGETAKCKKVVCDPSYLPDKVKKVGKVARA+CIMSHPIP+T++SH
Sbjct: 257 KVEFAGDGKAYGVTSEGETAKCKKVVCDPSYLPDKVKKVGKVARAVCIMSHPIPDTNDSH 316

Query: 357 SVQVILPQKQLGRKSDMYLFCCSYTHNVAPKGKYIAFVSTEAETDQPEAELKPGIELLGP 536
           S QVILPQKQLGRKSDMYLFCCSY HNVAPKGK+IAFVSTEAETD PE ELKPGI+LLGP
Sbjct: 317 SAQVILPQKQLGRKSDMYLFCCSYAHNVAPKGKFIAFVSTEAETDNPEVELKPGIDLLGP 376

Query: 537 VDEIFYEIYDRYEPINNHDEDHCFISESYDGTTHFESTVQDVLAMYSKITGK 692
           VDEIFYE YDRY PINNH+ D+CFIS SYDG+THFESTV DVLAMYSKITGK
Sbjct: 377 VDEIFYETYDRYVPINNHETDNCFISTSYDGSTHFESTVTDVLAMYSKITGK 428



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 47/57 (82%), Positives = 51/57 (89%)
 Frame = +3

Query: 30  KVLHMDRNDYYGGESSSLNLVQLWKRFRGDNKPPEQLGSSKEYNVDMIPKVEFDANG 200
           KVLHMDRNDYYGG S+SLNL+QLWKRFRG++KPPEQLG SKEYNVDMIPK    ANG
Sbjct: 29  KVLHMDRNDYYGGASTSLNLIQLWKRFRGNDKPPEQLGLSKEYNVDMIPKFMM-ANG 84


>ref|XP_004137066.1| PREDICTED: rab GDP dissociation inhibitor alpha-like [Cucumis
           sativus]
          Length = 469

 Score =  318 bits (816), Expect = 1e-84
 Identities = 150/172 (87%), Positives = 161/172 (93%)
 Frame = +3

Query: 177 KVEFDANGKAFGVTSEGETAKCKKVVCDPSYLPDKVKKVGKVARAICIMSHPIPETSESH 356
           KVEF  +GKA+GVTSEGETAKCKKVVCDPSYLPDKVKKVGKVARA+CIMSHPIP+T++SH
Sbjct: 281 KVEFAGDGKAYGVTSEGETAKCKKVVCDPSYLPDKVKKVGKVARAVCIMSHPIPDTNDSH 340

Query: 357 SVQVILPQKQLGRKSDMYLFCCSYTHNVAPKGKYIAFVSTEAETDQPEAELKPGIELLGP 536
           S QVILPQKQLGRKSDMYLFCCSY HNVAPKGK+IAFVSTEAETD PE ELKPGI+LLGP
Sbjct: 341 SAQVILPQKQLGRKSDMYLFCCSYAHNVAPKGKFIAFVSTEAETDNPEVELKPGIDLLGP 400

Query: 537 VDEIFYEIYDRYEPINNHDEDHCFISESYDGTTHFESTVQDVLAMYSKITGK 692
           VDEIFYE YDRY PINNH+ D+CFIS SYDG+THFESTV DVLAMYSKITGK
Sbjct: 401 VDEIFYETYDRYVPINNHETDNCFISTSYDGSTHFESTVTDVLAMYSKITGK 452



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 47/57 (82%), Positives = 51/57 (89%)
 Frame = +3

Query: 30  KVLHMDRNDYYGGESSSLNLVQLWKRFRGDNKPPEQLGSSKEYNVDMIPKVEFDANG 200
           KVLHMDRNDYYGG S+SLNL+QLWKRFRG++KPPEQLG SKEYNVDMIPK    ANG
Sbjct: 53  KVLHMDRNDYYGGASTSLNLIQLWKRFRGNDKPPEQLGLSKEYNVDMIPKFMM-ANG 108


>ref|XP_002268877.1| PREDICTED: rab GDP dissociation inhibitor alpha [Vitis vinifera]
           gi|296087426|emb|CBI34015.3| unnamed protein product
           [Vitis vinifera]
          Length = 445

 Score =  315 bits (807), Expect = 1e-83
 Identities = 148/172 (86%), Positives = 163/172 (94%)
 Frame = +3

Query: 177 KVEFDANGKAFGVTSEGETAKCKKVVCDPSYLPDKVKKVGKVARAICIMSHPIPETSESH 356
           KVEFD NGKAFGVTSEGETAKCKKVVCDPSYLPDKV+KVGKVARAICIMSH IP+T++SH
Sbjct: 257 KVEFDENGKAFGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVARAICIMSHSIPDTNDSH 316

Query: 357 SVQVILPQKQLGRKSDMYLFCCSYTHNVAPKGKYIAFVSTEAETDQPEAELKPGIELLGP 536
           SVQVILPQKQLGRKSDMYLFCCSY+HNVAPKGKYIAFV+TEAETDQPE ELK G++LLGP
Sbjct: 317 SVQVILPQKQLGRKSDMYLFCCSYSHNVAPKGKYIAFVTTEAETDQPEVELKRGVDLLGP 376

Query: 537 VDEIFYEIYDRYEPINNHDEDHCFISESYDGTTHFESTVQDVLAMYSKITGK 692
           VDEIFYE YDR+EP N+H+ DHCFIS SYD TTHFESTV++V+AMYSKITG+
Sbjct: 377 VDEIFYETYDRFEPKNDHEVDHCFISTSYDATTHFESTVKNVIAMYSKITGE 428



 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 44/57 (77%), Positives = 51/57 (89%)
 Frame = +3

Query: 30  KVLHMDRNDYYGGESSSLNLVQLWKRFRGDNKPPEQLGSSKEYNVDMIPKVEFDANG 200
           KVLHMDRN+YYGGESSSL+L QLW+RFRG+++PPE LGSS+EYNVDMIPK    ANG
Sbjct: 29  KVLHMDRNEYYGGESSSLSLKQLWQRFRGNDQPPESLGSSREYNVDMIPKFMM-ANG 84


>emb|CAN64340.1| hypothetical protein VITISV_031564 [Vitis vinifera]
          Length = 445

 Score =  315 bits (807), Expect = 1e-83
 Identities = 150/172 (87%), Positives = 159/172 (92%)
 Frame = +3

Query: 177 KVEFDANGKAFGVTSEGETAKCKKVVCDPSYLPDKVKKVGKVARAICIMSHPIPETSESH 356
           KVEFD NGKAFGVTSEGETAKCKKVVCDPSYLPDKV  VGKVARAICIMSHPIP TS+SH
Sbjct: 257 KVEFDENGKAFGVTSEGETAKCKKVVCDPSYLPDKVGTVGKVARAICIMSHPIPNTSDSH 316

Query: 357 SVQVILPQKQLGRKSDMYLFCCSYTHNVAPKGKYIAFVSTEAETDQPEAELKPGIELLGP 536
           SVQVILPQKQLGRKSDMYLFCCSY+HNVAPKGKYIAFV+TEAETD PE ELKPGIELLG 
Sbjct: 317 SVQVILPQKQLGRKSDMYLFCCSYSHNVAPKGKYIAFVTTEAETDNPEIELKPGIELLGQ 376

Query: 537 VDEIFYEIYDRYEPINNHDEDHCFISESYDGTTHFESTVQDVLAMYSKITGK 692
           VDEIF++ YDRYEP N  DED+CFIS SYD TTHFESTV+DV+AMYS+ITGK
Sbjct: 377 VDEIFFDAYDRYEPANKQDEDNCFISTSYDATTHFESTVEDVIAMYSRITGK 428



 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 47/57 (82%), Positives = 51/57 (89%)
 Frame = +3

Query: 30  KVLHMDRNDYYGGESSSLNLVQLWKRFRGDNKPPEQLGSSKEYNVDMIPKVEFDANG 200
           KVLHMDRNDYYGGES+SLNL QLWKRFRGD+KPPE LGSSK+YN+DMIPK    ANG
Sbjct: 29  KVLHMDRNDYYGGESTSLNLNQLWKRFRGDDKPPENLGSSKDYNIDMIPKFMM-ANG 84


>ref|XP_002533685.1| protein with unknown function [Ricinus communis]
           gi|223526420|gb|EEF28701.1| protein with unknown
           function [Ricinus communis]
          Length = 445

 Score =  312 bits (799), Expect = 1e-82
 Identities = 145/172 (84%), Positives = 159/172 (92%)
 Frame = +3

Query: 177 KVEFDANGKAFGVTSEGETAKCKKVVCDPSYLPDKVKKVGKVARAICIMSHPIPETSESH 356
           KVEFD +GKA+GVTSEGETAKCKKVVCDPSYLP+KVK +GKVARAICIMSHPIP T +SH
Sbjct: 257 KVEFDVDGKAYGVTSEGETAKCKKVVCDPSYLPNKVKTIGKVARAICIMSHPIPNTHDSH 316

Query: 357 SVQVILPQKQLGRKSDMYLFCCSYTHNVAPKGKYIAFVSTEAETDQPEAELKPGIELLGP 536
           SVQVILPQKQL RKSDMYLFCCSYTHNVAPKGKYIAFV+TEAETD P+ ELKPG++LLGP
Sbjct: 317 SVQVILPQKQLARKSDMYLFCCSYTHNVAPKGKYIAFVTTEAETDDPQTELKPGLDLLGP 376

Query: 537 VDEIFYEIYDRYEPINNHDEDHCFISESYDGTTHFESTVQDVLAMYSKITGK 692
           VDE+F+E YDRYEP N HD D+CFIS SYD TTHFE+TVQDV+AMYSKITGK
Sbjct: 377 VDEMFFETYDRYEPTNQHDVDNCFISTSYDATTHFETTVQDVIAMYSKITGK 428



 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 46/57 (80%), Positives = 51/57 (89%)
 Frame = +3

Query: 30  KVLHMDRNDYYGGESSSLNLVQLWKRFRGDNKPPEQLGSSKEYNVDMIPKVEFDANG 200
           KVLHMDRNDYYGGES+SLNL QLWKRFRGD+KPPE LG+S++YNVDMIPK    ANG
Sbjct: 29  KVLHMDRNDYYGGESTSLNLNQLWKRFRGDDKPPESLGASRDYNVDMIPKFMM-ANG 84


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