BLASTX nr result

ID: Coptis24_contig00029497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029497
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABU45197.1| unknown [Petunia integrifolia subsp. inflata]           59   3e-17
gb|ABU45211.1| unknown [Solanum bulbocastanum]                         58   6e-17
gb|ABU45177.1| unknown [Solanum melongena]                             57   2e-16
ref|XP_003611961.1| Vicilin-like antimicrobial peptides 2-3 [Med...    55   2e-16
gb|AAG01128.1|AF273333_13 BAC19.13 [Solanum lycopersicum]              56   4e-15

>gb|ABU45197.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 750

 Score = 59.3 bits (142), Expect(2) = 3e-17
 Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 7/62 (11%)
 Frame = +1

Query: 124 FRVKEGDVFAVPRFHPM--MAYNNDTLVQWQA*TTLK-----FLAGKSSVLQTLDKDTLG 282
           F+V+EGDVF++PRFHPM  MA+NN++ V     TT K     +LAGK+SVL+TLD+  L 
Sbjct: 336 FKVEEGDVFSIPRFHPMAQMAFNNNSFVFVGFSTTAKKHHPQYLAGKASVLRTLDRQILA 395

Query: 283 LS 288
            S
Sbjct: 396 AS 397



 Score = 53.9 bits (128), Expect(2) = 3e-17
 Identities = 21/42 (50%), Positives = 31/42 (73%)
 Frame = +3

Query: 3   GPHWNPRASEIAIEMHGQGMMRVVCSSLANASE*KNRRFRLQ 128
           GPHWNP A+EI I + G+GM+R+VCS+     + KN RF+++
Sbjct: 298 GPHWNPMATEIGIALQGEGMVRLVCSNTGTDQQCKNMRFKVE 339


>gb|ABU45211.1| unknown [Solanum bulbocastanum]
          Length = 734

 Score = 58.2 bits (139), Expect(2) = 6e-17
 Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 7/82 (8%)
 Frame = +1

Query: 124 FRVKEGDVFAVPRFHPM--MAYNNDTLVQWQA*TTLK-----FLAGKSSVLQTLDKDTLG 282
           F+++EGDVF VPRFHPM  MA+NN++ V     TT K     +L G++SVLQTLD+  L 
Sbjct: 341 FKMEEGDVFVVPRFHPMAQMAFNNNSFVFVGFSTTTKKHHPQYLTGRASVLQTLDRHILE 400

Query: 283 LSHVL*RS*EHRVVKKNCDTSV 348
            S  +  +  H++++   D+ +
Sbjct: 401 ASFNVANTTMHQILEAQGDSVI 422



 Score = 53.9 bits (128), Expect(2) = 6e-17
 Identities = 22/42 (52%), Positives = 30/42 (71%)
 Frame = +3

Query: 3   GPHWNPRASEIAIEMHGQGMMRVVCSSLANASE*KNRRFRLQ 128
           GPHWNP A+EI I + G+GM+RVVCS+       KN RF+++
Sbjct: 303 GPHWNPMATEIGIAIQGEGMVRVVCSNSGTGQGCKNMRFKME 344


>gb|ABU45177.1| unknown [Solanum melongena]
          Length = 814

 Score = 57.4 bits (137), Expect(2) = 2e-16
 Identities = 34/62 (54%), Positives = 42/62 (67%), Gaps = 7/62 (11%)
 Frame = +1

Query: 124 FRVKEGDVFAVPRFHPM--MAYNNDTLVQWQA*TTLK-----FLAGKSSVLQTLDKDTLG 282
           F+V EGDVF VPRFHPM  MA+NN++ V     TT K     +LAGK+SVL+TLD+  L 
Sbjct: 318 FKVDEGDVFVVPRFHPMAQMAFNNNSFVFVGFSTTTKKHHPQYLAGKASVLRTLDRHILE 377

Query: 283 LS 288
            S
Sbjct: 378 AS 379



 Score = 53.1 bits (126), Expect(2) = 2e-16
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +3

Query: 3   GPHWNPRASEIAIEMHGQGMMRVVCSSLANASE*KNRRFRL 125
           GPHWNP A+EI I + G+GM+RVVCS+       KN RF++
Sbjct: 280 GPHWNPMATEIGIAIQGEGMVRVVCSNTGTGQGCKNMRFKV 320


>ref|XP_003611961.1| Vicilin-like antimicrobial peptides 2-3 [Medicago truncatula]
           gi|358344413|ref|XP_003636284.1| Vicilin-like
           antimicrobial peptides 2-3 [Medicago truncatula]
           gi|355502219|gb|AES83422.1| Vicilin-like antimicrobial
           peptides 2-3 [Medicago truncatula]
           gi|355513296|gb|AES94919.1| Vicilin-like antimicrobial
           peptides 2-3 [Medicago truncatula]
          Length = 735

 Score = 55.5 bits (132), Expect(2) = 2e-16
 Identities = 24/42 (57%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   GPHWNPRASEIAIEMHGQGMMRVVCSSLANASE*KNRRFRLQ 128
           GPHWNP A+E+A+ + G+GM+RVVC S  N  + KN+RFR+Q
Sbjct: 323 GPHWNPMATEVAVVLEGEGMVRVVCGS-NNDDKCKNKRFRVQ 363



 Score = 54.7 bits (130), Expect(2) = 2e-16
 Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
 Frame = +1

Query: 124 FRVKEGDVFAVPRFHPM--MAYNNDTLVQWQA*TTLK-----FLAGKSSVLQTLDKDTLG 282
           FRV++GDVF VPRFHPM  M++ N  LV     T  K     FLAGK SVLQ LD++ + 
Sbjct: 360 FRVQQGDVFVVPRFHPMAQMSFVNQPLVFMGFSTAAKKNHPQFLAGKESVLQILDREIVA 419

Query: 283 LSHVL*RS*EHRVVKKNCDTSVF 351
            S  +  +   ++++K  D+ +F
Sbjct: 420 TSLGVSNTTIDKLLEKPDDSIIF 442


>gb|AAG01128.1|AF273333_13 BAC19.13 [Solanum lycopersicum]
          Length = 499

 Score = 55.8 bits (133), Expect(2) = 4e-15
 Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
 Frame = +1

Query: 124 FRVKEGDVFAVPRFHPM--MAYNNDTLVQWQA*TTLK-----FLAGKSSVLQTLDKDTLG 282
           F+V+EGDVF VPRF PM  MA+NN++ V     TT K     +L GK+SVL+TLD+  L 
Sbjct: 149 FKVEEGDVFVVPRFDPMAQMAFNNNSFVFVGFSTTTKKHHPQYLTGKASVLRTLDRQILE 208

Query: 283 LSHVL*RS*EHRVVKKNCDTSV 348
            S  +  +  H++++   D+ +
Sbjct: 209 ASFNVGNTTMHQILEAQGDSVI 230



 Score = 50.1 bits (118), Expect(2) = 4e-15
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = +3

Query: 3   GPHWNPRASEIAIEMHGQGMMRVVCSSLANASE*KNRRFRLQ 128
           GPHWNP A+EI I + G+GM+RVVCS        KN RF+++
Sbjct: 113 GPHWNPMATEIGIAIQGEGMVRVVCSKSGTGC--KNMRFKVE 152


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