BLASTX nr result

ID: Coptis24_contig00029483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029483
         (198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526610.1| mgatp-energized glutathione s-conjugate pump...   127   9e-28
ref|XP_002281070.1| PREDICTED: ABC transporter C family member 2...   123   2e-26
ref|XP_002317351.1| multidrug resistance protein ABC transporter...   122   2e-26
ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump...   122   4e-26
ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2...   121   5e-26

>ref|XP_002526610.1| mgatp-energized glutathione s-conjugate pump, putative [Ricinus
           communis] gi|223534050|gb|EEF35769.1| mgatp-energized
           glutathione s-conjugate pump, putative [Ricinus
           communis]
          Length = 1626

 Score =  127 bits (319), Expect = 9e-28
 Identities = 54/66 (81%), Positives = 59/66 (89%)
 Frame = -1

Query: 198 YFGWMTPIMQQGYKHPITEKDVWKLDTWDQTETLNNKFQRCWVDESRKQKPWLLRALHRS 19
           YFGWMTP+MQQGYK PITEKDVWKLDTWDQTETL  KFQRCW+ ES+K KPWLLRAL+ S
Sbjct: 238 YFGWMTPLMQQGYKKPITEKDVWKLDTWDQTETLIKKFQRCWIKESQKPKPWLLRALNNS 297

Query: 18  VGGRFW 1
           +G RFW
Sbjct: 298 LGRRFW 303


>ref|XP_002281070.1| PREDICTED: ABC transporter C family member 2-like [Vitis vinifera]
          Length = 1624

 Score =  123 bits (308), Expect = 2e-26
 Identities = 50/66 (75%), Positives = 61/66 (92%)
 Frame = -1

Query: 198 YFGWMTPIMQQGYKHPITEKDVWKLDTWDQTETLNNKFQRCWVDESRKQKPWLLRALHRS 19
           YFGWMTP+MQQGYK PITEKD+WKLDTWDQTETL+ +FQ+CW++ES++ KP LLRAL+ S
Sbjct: 239 YFGWMTPLMQQGYKKPITEKDIWKLDTWDQTETLSRRFQKCWIEESQRSKPRLLRALNCS 298

Query: 18  VGGRFW 1
           +GGRFW
Sbjct: 299 LGGRFW 304


>ref|XP_002317351.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222860416|gb|EEE97963.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1617

 Score =  122 bits (307), Expect = 2e-26
 Identities = 49/65 (75%), Positives = 59/65 (90%)
 Frame = -1

Query: 195 FGWMTPIMQQGYKHPITEKDVWKLDTWDQTETLNNKFQRCWVDESRKQKPWLLRALHRSV 16
           FGWM+P+M+ GY+ PITEKDVWKLDTWD+TETLN++FQ+CW +E RK KPWLLRALH S+
Sbjct: 233 FGWMSPLMKLGYRRPITEKDVWKLDTWDRTETLNDRFQKCWAEELRKPKPWLLRALHSSL 292

Query: 15  GGRFW 1
           GGRFW
Sbjct: 293 GGRFW 297


>ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump, putative [Ricinus
           communis] gi|223534049|gb|EEF35768.1| mgatp-energized
           glutathione s-conjugate pump, putative [Ricinus
           communis]
          Length = 1569

 Score =  122 bits (305), Expect = 4e-26
 Identities = 50/65 (76%), Positives = 57/65 (87%)
 Frame = -1

Query: 195 FGWMTPIMQQGYKHPITEKDVWKLDTWDQTETLNNKFQRCWVDESRKQKPWLLRALHRSV 16
           F WM PIMQ GYK P+TEKDVWKLD WD+TETLNNKFQ+CW +ESR+ KPWLLRAL+ S+
Sbjct: 183 FAWMNPIMQLGYKRPLTEKDVWKLDIWDRTETLNNKFQKCWAEESRRPKPWLLRALNSSL 242

Query: 15  GGRFW 1
           GGRFW
Sbjct: 243 GGRFW 247


>ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2 isoform 2 [Vitis
           vinifera]
          Length = 1616

 Score =  121 bits (304), Expect = 5e-26
 Identities = 51/65 (78%), Positives = 57/65 (87%)
 Frame = -1

Query: 195 FGWMTPIMQQGYKHPITEKDVWKLDTWDQTETLNNKFQRCWVDESRKQKPWLLRALHRSV 16
           FGWM PIMQ G K PITEKDVWKLD+WDQTETLNN FQRCW +E+ + KPWLLRAL+RS+
Sbjct: 233 FGWMNPIMQLGSKRPITEKDVWKLDSWDQTETLNNNFQRCWAEEALRPKPWLLRALNRSL 292

Query: 15  GGRFW 1
           GGRFW
Sbjct: 293 GGRFW 297


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